Glyma06g26370 - SoyBase

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Report for Sequence Feature Glyma06g26370

Feature Type:	gene_model
Chromosome:	Gm06
Start:	24221484
stop:	24224455
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g26370

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G31200	AT	Annotation by Michelle Graham. TAIR10: phloem protein 2-A9 \| chr1:11146923-11147678 REVERSE LENGTH=180	SoyBase	E_val: 5.00E-32	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0030246	GO-mf	Annotation by Michelle Graham. GO Molecular Function: carbohydrate binding	SoyBase	N/A	ISS
UniRef100_C6SW81	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6SW81_SOYBN	SoyBase	E_val: 1.00E-113	ISS
UniRef100_Q9XG10	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Lectin n=1 Tax=Glycine max RepID=Q9XG10_SOYBN	SoyBase	E_val: 1.00E-111	ISS

Expression Patterns of Glyma06g26370

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g26370 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g221100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g26370

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g26370

Limit To All Plant Sequences

>Glyma06g26370.1   sequence type=CDS   gene model=Glyma06g26370   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCTTTCAAGAAGCCTCATCACACCTCAGACAAGAACTACATAACAGGGGACGACGGAGGCAAGTTCGAGATACAACCTAGAGGACTCAACATTGTGTGGGGAAATGATTCTCGATACTGGAAAATTCCAGAACAAGGTCCTGCGGAGCTGATCCAAGTTTCATGGTTGGAGGTATCCGGCGTGGTAAACTTACCAGGTGTCAAGAAATATAGGGTTGAATTCGAAGTGAGAGTTAAAGACGATGGGTTCGGTTGGAGTGGCACGGACGTGCTAGTGATGGCTAAGATTGGGAAAACGGGAAAATATACGTATAAGGTGACGAAACTAAACCCTGGTGAAACCTTGAATATTCCAAAATCAACTGACCCACTTGAGATTCAAGTGAACAAGCAATCTGAGGACCTTCACTTTGGATTATATGAAGTGTGGAGCGGAAAATGGAAGGGAGGCCTTGAAATTGTCAGAGCCCTCATCAAACCTTTAACTTAA

Predicted protein sequences of Glyma06g26370

Limit To All Plant Sequences

>Glyma06g26370.1   sequence type=predicted peptide   gene model=Glyma06g26370   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPFKKPHHTSDKNYITGDDGGKFEIQPRGLNIVWGNDSRYWKIPEQGPAELIQVSWLEVSGVVNLPGVKKYRVEFEVRVKDDGFGWSGTDVLVMAKIGKTGKYTYKVTKLNPGETLNIPKSTDPLEIQVNKQSEDLHFGLYEVWSGKWKGGLEIVRALIKPLT*

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