Report for Sequence Feature Glyma06g25350
Feature Type: gene_model
Chromosome: Gm06
Start: 23220387
stop: 23220692
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g25350
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G20200 AT
Annotation by Michelle Graham. TAIR10: nucleoporin-related | chr5:6816776-6821620 FORWARD LENGTH=762
SoyBase E_val: 7.00E-21 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_UPI0002339CD9 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002339CD9 related cluster n=1 Tax=unknown RepID=UPI0002339CD9
SoyBase E_val: 7.00E-65 ISS
Expression Patterns of Glyma06g25350
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g25350 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma06g25350
Coding sequences of Glyma06g25350
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g25350.1 sequence type=CDS gene model=Glyma06g25350 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GGTCAGGATGAAATTGGTGCTTCACCAATAGAGATTGCTAGAGCATATATGGATTCCCGTGCATTAGAAGCAGGTCCCTGTTCTAAGAACATGATTCATACTGTTGAAAGCACTATGTTGCATGGTGATGAAGCTGCAATAAAACCATATGATCCATCACCATCAAAGAAATCGTCAACATGTTGGCCGGGTGCTGTGGTGCAGGATGCTTACATAACACCACAAAGTCAGAGAAACAGATATGGACTTCATAACTTCCCCCGTACTCCTTATTCCAGAACTCTTTTAACAAAGTCCAAGTCCAAG
Predicted protein sequences of Glyma06g25350
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g25350.1 sequence type=predicted peptide gene model=Glyma06g25350 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GQDEIGASPIEIARAYMDSRALEAGPCSKNMIHTVESTMLHGDEAAIKPYDPSPSKKSSTCWPGAVVQDAYITPQSQRNRYGLHNFPRTPYSRTLLTKSKSK