Report for Sequence Feature Glyma06g24830
Feature Type: gene_model
Chromosome: Gm06
Start: 22604193
stop: 22606284
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g24830
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G57340 AT
Annotation by Michelle Graham. TAIR10: Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977) | chr3:21219175-21220278 FORWARD LENGTH=367
SoyBase E_val: 3.00E-143 ISS
GO:0006457 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein folding
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0031072 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heat shock protein binding
SoyBase N/A ISS
GO:0051082 GO-mf
Annotation by Michelle Graham. GO Molecular Function: unfolded protein binding
SoyBase N/A ISS
KOG0714
KOG
Molecular chaperone (DnaJ superfamily)
JGI ISS
PTHR24077 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24077:SF92 Panther
JGI ISS
PF00226 PFAM
DnaJ domain
JGI ISS
PF09320 PFAM
Domain of unknown function (DUF1977)
JGI ISS
UniRef100_B9SEQ7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein HLJ1, putative n=1 Tax=Ricinus communis RepID=B9SEQ7_RICCO
SoyBase E_val: 2.00E-148 ISS
UniRef100_I1KDB5 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDB5_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g24830
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g24830 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g217000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g24830
Coding sequences of Glyma06g24830
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g24830.1 sequence type=CDS gene model=Glyma06g24830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATGGGAACAAGGACGACGCGTTGAAATGTTTAAGAATCGGCAAAGAGGCGATGGAAAGCGGCGATCGGTCACGCGCTTTGAAGTTCGTGACGAAGGCGCGTCGCCTCGACCCCACTCTCCCCGTCGACGATCTATTGTCCACGATAGAGGTGGATGCAGGGGATCAGGCCCCCGCCGCCGAGGCGGAGGGCCCCACGAAGCCCACTGATCAACCTTCTATCCGCCGGAGGGCCACCGGGGCGGCTGCGACCGTCTCGGCCGGGCCCTCGTCGGCCTCGTCCTCTTCGGCCTCGTACACCGAAGAGCAAGTCTCAATTATTAGGGAAATTAAGAGGAAGAAAAACTTTTATGAGATATTGGGATTGGAGAAGACTTGCACTGTTGAGGATGTGAGGAAATCGTACAGGAAACTGTCTCTTAAGGTTCATCCCGATAAGAACAAAGCCCCTGGTGCCGAGGAAGCATTCAAGGCCGTTTCAAAGGCGTTTCAGTGTCTTAGTAATGAAGAGAGTAAGAGAAAGTATGATGTTTCGGGTGAGGATGAAGCGGTTTACGAGCAGCGTGCGGCAAGGCCGGCGGCCCGAGGTTATAATGGTTACTATGAGGCTGATATTGATGCTGAGGAGATATTCAGGAACTTCTTTGGAGGAATGGCCCCTGCAGCCAATTTTGGAGGATTCAGTTTTGGACCAGCTGGTTTCAATGGGTTCAATGGTCATAGGCATGCTGCTGATCATGGTTCTGGTGGTTTTAATGTTCGCGCTTTAATTCAGTTGCTGCCTGTGCTGCTGATTGTGTTATTGAACTTTTTGCCTTCATCGGAGCCCTTGTACTCGCTTTCGAAGAGTTATCCTTATGAACATCGGTTTACCACACCCAAGGGTGTTAACTATTATGTCAAGTCTACAAACTTTGTTCAGGAGTATCCGTTGGGGAGTGATGAACGATCAAAAATTGAAGAGAGGGTAGAGAGGGAGTACTTCAGCATTCTCCGCCAGAATTGTCATTTCGAGTTGCAGCGTCGCCAATGGGGGTATATCCGGGAAACACCCCATTGTGATATGTTGCGGAAGTTTGAGGTGGTGAATTGA
Predicted protein sequences of Glyma06g24830
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g24830.1 sequence type=predicted peptide gene model=Glyma06g24830 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDGNKDDALKCLRIGKEAMESGDRSRALKFVTKARRLDPTLPVDDLLSTIEVDAGDQAPAAEAEGPTKPTDQPSIRRRATGAAATVSAGPSSASSSSASYTEEQVSIIREIKRKKNFYEILGLEKTCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESKRKYDVSGEDEAVYEQRAARPAARGYNGYYEADIDAEEIFRNFFGGMAPAANFGGFSFGPAGFNGFNGHRHAADHGSGGFNVRALIQLLPVLLIVLLNFLPSSEPLYSLSKSYPYEHRFTTPKGVNYYVKSTNFVQEYPLGSDERSKIEERVEREYFSILRQNCHFELQRRQWGYIRETPHCDMLRKFEVVN*