|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G20060 | AT | Annotation by Michelle Graham. TAIR10: alpha/beta-Hydrolases superfamily protein | chr5:6776800-6779447 FORWARD LENGTH=252 | SoyBase | E_val: 5.00E-24 | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0016787 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity | SoyBase | N/A | ISS |
PTHR10655 | Panther | LYSOPHOSPHOLIPASE-RELATED | JGI | ISS | |
PTHR10655:SF5 | Panther | CARBOXYLESTERASE | JGI | ISS | |
PF02230 | PFAM | Phospholipase/Carboxylesterase | JGI | ISS | |
UniRef100_B9SEM5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Acyl-protein thioesterase, putative n=1 Tax=Ricinus communis RepID=B9SEM5_RICCO | SoyBase | E_val: 2.00E-29 | ISS |
UniRef100_UPI00023398CA | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00023398CA related cluster n=1 Tax=unknown RepID=UPI00023398CA | SoyBase | E_val: 5.00E-36 | ISS |
Glyma06g24671 not represented in the dataset |
Glyma06g24671 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.06g215900 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g24671.1 sequence type=CDS gene model=Glyma06g24671 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCTATTGGTAATTTAACTTTGAATTGTGGACTGAATAACATTTGCATTTATATACTTTCAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCAAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAACGGGCTTGGACACTACACCATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGGGCCTTGAGGGGAACATTGCTTAG
>Glyma06g24671.1 sequence type=predicted peptide gene model=Glyma06g24671 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAIGNLTLNCGLNNICIYILSVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLGLEGNIA*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||