Report for Sequence Feature Glyma06g24600
Feature Type: gene_model
Chromosome: Gm06
Start: 22156835
stop: 22164314
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g24600
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G04870 AT
Annotation by Michelle Graham. TAIR10: protein arginine methyltransferase 10 | chr1:1373485-1375598 REVERSE LENGTH=383
SoyBase E_val: 0 ISS
GO:0009909 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of flower development
SoyBase N/A ISS
GO:0010228 GO-bp
Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem
SoyBase N/A ISS
GO:0019919 GO-bp
Annotation by Michelle Graham. GO Biological Process: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
SoyBase N/A ISS
GO:0034968 GO-bp
Annotation by Michelle Graham. GO Biological Process: histone lysine methylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0008168 GO-mf
Annotation by Michelle Graham. GO Molecular Function: methyltransferase activity
SoyBase N/A ISS
GO:0008469 GO-mf
Annotation by Michelle Graham. GO Molecular Function: histone-arginine N-methyltransferase activity
SoyBase N/A ISS
GO:0016277 GO-mf
Annotation by Michelle Graham. GO Molecular Function: [myelin basic protein]-arginine N-methyltransferase activity
SoyBase N/A ISS
GO:0035241 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein-arginine omega-N monomethyltransferase activity
SoyBase N/A ISS
GO:0035242 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein-arginine omega-N asymmetric methyltransferase activity
SoyBase N/A ISS
KOG1499
KOG
Protein arginine N-methyltransferase PRMT1 and related enzymes
JGI ISS
PTHR11006 Panther
PROTEIN ARGININE N-METHYLTRANSFERASE
JGI ISS
PTHR11006:SF34 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF05185 PFAM
PRMT5 arginine-N-methyltransferase
JGI ISS
UniRef100_D7KE86 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Arginine N-methyltransferase family protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7KE86_ARALL
SoyBase E_val: 0 ISS
UniRef100_I1KDA6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KDA6_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g24600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g24600 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g215400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g24600
Coding sequences of Glyma06g24600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g24600.1 sequence type=CDS gene model=Glyma06g24600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGAACCTCTGCGAACGCTGTCGCAGGTGGTCGTGGCGGCGCCCCTGTCCCCAAAGACGTCGACTACGCTAATTACTTCTGCACCTATGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGACCGCGTTCGCATGGACGCTTACTTCGACGCCATTTTTCAAAACAAACGCCACTTCGCTGGCAAGACTGTTTTGGATGTGGGGACTGGAAGTGGCATTCTTGCTATATGGTCGGCACAAGCGGGTGCGAGGAAGGTGTATGCAGTGGAAGCAACCAAGATGTCAGAACATGCGCGTGCACTTGTCAAAGCGAATAATCTCCAGGATGTAGTTGAGGTCATTGAGGGATCGATGGAGGAAATTACCTTGCCAGAGAAAGTTGATGTGATCATCTCTGAATGGATGGGTTATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTTATAAATGCTCGTGACCGCTGGCTCAAACCAACAGGAGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCTATCCGGACTGGGATAGTAGATCACAAATTGGGCGATTACGAGTCGACTATGGATGATTGGCACCACTTTGTTGATGAAACAAAAACCTACTATGGTGTTGATATGAGCACTTTAACGAGGCCTTTTTCGGAGGAGCAGAGAAAATACTATCTACAGACATCATTGTGGAACAACCTTCATCCACATCAAGTCGTAGGAACTGCTGGTATAATAAAGGAAATTGATTGTTTAACTGCCACGGTGGCTGACATAGAGAAAGTCAGATCAGATTTTTCAATGTCAATAACCGTGGATAACACAAAGTTATGTGGATTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAAGTGAGGATCCAGCTGAACAAGAGATTGAGTTAACCACAGCTCCCAGTGTAAATTATGGTACACACTGGGGCCAACAGGTTTTCCTCTTGCATCCTCCCATGCATCTGAGTGAAGGTGATGATTTAAGGGTTTCTTTTCTAATGAGTCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGAACTTGGATGTGAGATTCATCAGCATTCTGGCAAGCTACTTGCACCTTTCAAAAATAAGTACTACATTGAATAA
Predicted protein sequences of Glyma06g24600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g24600.1 sequence type=predicted peptide gene model=Glyma06g24600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGTSANAVAGGRGGAPVPKDVDYANYFCTYAFLYHQKEMLSDRVRMDAYFDAIFQNKRHFAGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARALVKANNLQDVVEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVINARDRWLKPTGVMYPSHARMWMAPIRTGIVDHKLGDYESTMDDWHHFVDETKTYYGVDMSTLTRPFSEEQRKYYLQTSLWNNLHPHQVVGTAGIIKEIDCLTATVADIEKVRSDFSMSITVDNTKLCGFGGWFDVHFRGRSEDPAEQEIELTTAPSVNYGTHWGQQVFLLHPPMHLSEGDDLRVSFLMSRSKENHRLMEVELGCEIHQHSGKLLAPFKNKYYIE*