|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G38360 | AT | Annotation by Michelle Graham. TAIR10: prenylated RAB acceptor 1.B4 | chr2:16069840-16070502 REVERSE LENGTH=220 | SoyBase | E_val: 1.00E-37 | ISS |
GO:0016192 | GO-bp | Annotation by Michelle Graham. GO Biological Process: vesicle-mediated transport | SoyBase | N/A | ISS |
GO:0005768 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: endosome | SoyBase | N/A | ISS |
GO:0005783 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: endoplasmic reticulum | SoyBase | N/A | ISS |
GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
GO:0005802 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: trans-Golgi network | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
PTHR19317 | Panther | PRENYLATED RAB ACCEPTOR 1-RELATED | JGI | ISS | |
PF03208 | PFAM | PRA1 family protein | JGI | ISS | |
UniRef100_G7K792 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: PRA1 family protein B1 n=1 Tax=Medicago truncatula RepID=G7K792_MEDTR | SoyBase | E_val: 1.00E-35 | ISS |
UniRef100_UPI00023398C6 | UniRef | Annotation by Michelle Graham. Best UniRef hit: UPI00023398C6 related cluster n=1 Tax=unknown RepID=UPI00023398C6 | SoyBase | E_val: 6.00E-67 | ISS |
Glyma06g24046 not represented in the dataset |
Glyma06g24046 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.06g212600 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g24046.1 sequence type=CDS gene model=Glyma06g24046 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCTTGCGCTTTCGCTCATCACGCATTCGTTCTCGCTATTCGTCCTCTTCGGTCTCCTCGCGTCGTGGTCGTTCCTTTATCTCTTTCTCCCTTCGGATCAGCCTGTCGTCCTCTTCGAACGCACCTTTGTCATTTTGCTCACCAGTGTTGGATCCTTGTTGATCTCTGCCCTCATGGTTGGATTGGCGATCGTGTGCGCTTACGGGGCTTTTCGCGTTCCCGAGGATCTGTTTCTCGACGATCAGGAGCCTAACAGCTCCGGATTCCTCTCGTTCCTCGGCAGCGCCGCCACTTCTGCCGCCGCAGCGGCAGTCGCGCGCGTGTAA
>Glyma06g24046.1 sequence type=predicted peptide gene model=Glyma06g24046 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MLALSLITHSFSLFVLFGLLASWSFLYLFLPSDQPVVLFERTFVILLTSVGSLLISALMVGLAIVCAYGAFRVPEDLFLDDQEPNSSGFLSFLGSAATSAAAAAVARV*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||