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Report for Sequence Feature Glyma06g22384

Feature Type:gene_model
Chromosome:Gm06
Start:19191172
stop:19192297
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g22384
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G27950AT Annotation by Michelle Graham. TAIR10: P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:9984774-9987493 FORWARD LENGTH=625 SoyBaseE_val: 2.00E-75ISS
GO:0006612GO-bp Annotation by Michelle Graham. GO Biological Process: protein targeting to membrane SoyBaseN/AISS
GO:0007018GO-bp Annotation by Michelle Graham. GO Biological Process: microtubule-based movement SoyBaseN/AISS
GO:0009963GO-bp Annotation by Michelle Graham. GO Biological Process: positive regulation of flavonoid biosynthetic process SoyBaseN/AISS
GO:0010363GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of plant-type hypersensitive response SoyBaseN/AISS
GO:0003777GO-mf Annotation by Michelle Graham. GO Molecular Function: microtubule motor activity SoyBaseN/AISS
GO:0005524GO-mf Annotation by Michelle Graham. GO Molecular Function: ATP binding SoyBaseN/AISS
PTHR24115Panther FAMILY NOT NAMED JGI ISS
PTHR24115:SF33Panther SUBFAMILY NOT NAMED JGI ISS
PF00225PFAM Kinesin motor domain JGI ISS
UniRef100_B9REV0UniRef Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9REV0_RICCO SoyBaseE_val: 8.00E-78ISS
UniRef100_I1KD33UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KD33_SOYBN SoyBaseE_val: 8.00E-124ISS

Expression Patterns of Glyma06g22384
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g22384 not represented in the dataset
Glyma06g22384 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g22384 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g205200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g22384
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g22384
>Glyma06g22384.1   sequence type=CDS   gene model=Glyma06g22384   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGTGTTTTTGCCTATGGTCAAACAGGCACAGGCAAGACATTCACCATGGATGGTACAAATGAGGAGCCAAGAATTGTTCCGCGTGCACTTGAAGAGTTCTTTCGTCAAGCCTCTTTGGATAATTCATCTTCTTTTACTTTTACAATGAGCATGTTGGAAGTTTATATGGGCAATCTCAGGGACCTTTTATCTCCAAGACAGTCTAGTAGACCACATGAACAATATATGACAAAATCTACCTCTTGGACTAATGTGAATGAGGCATCAAGCAGGTCACACAGCTTGACGAGGATAAACATATTTCGGCATGGGGATGCATTGGAAGCCAAAAGTGAAGTAAGTAAATTGTGGATGATTGATCTTGAAGGCTGCAAACAGTTGCTTAAAACTGGAGCCAAAGGACTAACACTTGATGAGGGCAGAGCCATTAATCTTTCCCTTTCAGCTTTAGGTGATGTTGTTGCTGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGGAATAGCTAG
Predicted protein sequences of Glyma06g22384
>Glyma06g22384.1   sequence type=predicted peptide   gene model=Glyma06g22384   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MCVFAYGQTGTGKTFTMDGTNEEPRIVPRALEEFFRQASLDNSSSFTFTMSMLEVYMGNLRDLLSPRQSSRPHEQYMTKSTSWTNVNEASSRSHSLTRINIFRHGDALEAKSEVSKLWMIDLEGCKQLLKTGAKGLTLDEGRAINLSLSALGDVVAALKRKRCHVPYRNS*






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