|
A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT5G63400 | AT | Annotation by Michelle Graham. TAIR10: adenylate kinase 1 | chr5:25393502-25394817 REVERSE LENGTH=190 | SoyBase | E_val: 1.00E-75 | ISS |
| GO:0006094 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gluconeogenesis | SoyBase | N/A | ISS |
| GO:0006096 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glycolysis | SoyBase | N/A | ISS |
| GO:0006139 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleobase-containing compound metabolic process | SoyBase | N/A | ISS |
| GO:0006511 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ubiquitin-dependent protein catabolic process | SoyBase | N/A | ISS |
| GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
| GO:0009744 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus | SoyBase | N/A | ISS |
| GO:0009749 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to glucose stimulus | SoyBase | N/A | ISS |
| GO:0009750 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus | SoyBase | N/A | ISS |
| GO:0009853 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photorespiration | SoyBase | N/A | ISS |
| GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
| GO:0046939 | GO-bp | Annotation by Michelle Graham. GO Biological Process: nucleotide phosphorylation | SoyBase | N/A | ISS |
| GO:0051788 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to misfolded protein | SoyBase | N/A | ISS |
| GO:0080129 | GO-bp | Annotation by Michelle Graham. GO Biological Process: proteasome core complex assembly | SoyBase | N/A | ISS |
| GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
| GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
| GO:0005774 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane | SoyBase | N/A | ISS |
| GO:0004017 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: adenylate kinase activity | SoyBase | N/A | ISS |
| GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
| GO:0005524 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: ATP binding | SoyBase | N/A | ISS |
| GO:0016776 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, phosphate group as acceptor | SoyBase | N/A | ISS |
| GO:0019205 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleobase-containing compound kinase activity | SoyBase | N/A | ISS |
| PTHR23359 | Panther | ADENYLATE KINASE | JGI | ISS | |
| PF00406 | PFAM | Adenylate kinase | JGI | ISS | |
| PF05191 | PFAM | Adenylate kinase, active site lid | JGI | ISS | |
| UniRef100_B9I3N9 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Adenylate kinase 6 n=1 Tax=Populus trichocarpa RepID=B9I3N9_POPTR | SoyBase | E_val: 1.00E-77 | ISS |
| UniRef100_I1KC53 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1KC53_SOYBN | SoyBase | E_val: 2.00E-96 | ISS |
|
Glyma06g18020 not represented in the dataset |
Glyma06g18020 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.06g171800 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g18020.2 sequence type=CDS gene model=Glyma06g18020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGCAGAGATTGGTCACGCCTATTTAATGAGCGTGCCCTGTCCACCTGGGTCAGGAAAAGGCACCCAGTCACCAAGCATAAGAGATGAGTACTGCTTGTGCCACTTAGCTACTAGTGACATGTTAAGAGCAGCTGTGACAGCTAAAACCCCTTCTGGTATTAAGGCTAAAGAAGCTATGGATAATGGACAACTTCTTTCTGATGACTTGAAACCATCATGTCAAAAAGGTTTCATTCTTGATGGTTTTCCAAGAACTGTGGTCCAAGCACAGAAGCTTGATGAGATACTGGAAAAGCAGGGAAATAAAGTTGATAAGGTACTCAATTTTGCAATTTATGATGCTATCCTTGAGGAGCGGATTACTGGCCACTGGATATGCCCATCCACTGGCAAAACTTACCATACAAAATTTGCTCCTCCAAAGGTCCCTGGGGTTGATGATTTACTGGTGAACCTCTTATTCAACGCAAGGATGACCCTGCAACTGTTCTTAAGTCAAGACTAG
>Glyma06g18020.2 sequence type=predicted peptide gene model=Glyma06g18020 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MAEIGHAYLMSVPCPPGSGKGTQSPSIRDEYCLCHLATSDMLRAAVTAKTPSGIKAKEAMDNGQLLSDDLKPSCQKGFILDGFPRTVVQAQKLDEILEKQGNKVDKVLNFAIYDAILEERITGHWICPSTGKTYHTKFAPPKVPGVDDLLVNLLFNARMTLQLFLSQD*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||