Report for Sequence Feature Glyma06g15610
Feature Type: gene_model
Chromosome: Gm06
Start: 12275303
stop: 12278180
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g15610
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G18750 AT
Annotation by Michelle Graham. TAIR10: with no lysine (K) kinase 6 | chr3:6454307-6456830 REVERSE LENGTH=567
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0004713 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein tyrosine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG0584
KOG
Serine/threonine protein kinase
JGI ISS
PTHR13902 Panther
SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-RELATED
JGI ISS
PTHR13902:SF39 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_G7JAY9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase n=1 Tax=Medicago truncatula RepID=G7JAY9_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI00023381B0 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI00023381B0 related cluster n=1 Tax=unknown RepID=UPI00023381B0
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g15610
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma06g15610
Paralog Evidence Comments
Glyma04g39321 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma06g15610 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g151000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g15610
Coding sequences of Glyma06g15610
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g15610.1 sequence type=CDS gene model=Glyma06g15610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGTTTGATGGAAACAGAAAGCTCAGAAGAGGGTGCAGGCCTTCTAGAGCCTCCTGATCCTAACGTTCTTGAAATCGATCCTACTAATCGCTACATGAGGTATAACGAAGTTATTGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCGTTTGATGAAATCATTGGACTTGAAGTTGCATGGAGCCAAGTTCAGATTGATGAGGTATTGCAGACACCAGGTGGCTTAGAGAGGCTTTACTCAGAAGTGCATCTATTGAAGTCACTAAAGCACGACAGCATAGTAACTTTCTACAATTCCTGGATTGATGACAAGCACAGAACTCTTAACTTGATTACCGAGTTGTTCACCTCAGGGAGCCTCAGAAAGTATAGTAAGAAACACAAGAAGGTTGACATAAAGGCCGTTAAAGGATGGGCAAAGCAGATTTTAATGGGTTTAAACTATCTCCACAGTCACAACCCACCTATTATACATAGGGACCTGAAGTGTGATAATATATTTATTAATGGTCACCGAGGAGAAGTTAAAATTGGCGATCTAGGGTTGGCAACTCTGTTGAAGCAGACTACTGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGCTGCTCTTTCCAAACTCAAGGATCCAGAAGTAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTCTGAAGGACAATTTTCTCCAAGTGAATGGTTCATTGAAGAATCGTCGACTTCCATTGCCAGATATTGTTCTCCCTAAATATGGAACCTTCGAAAATCGTTGTCTTATGTCAGAAGGCCCAGCTAGTACACGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACTGAGCTTCCATTGACCACTTTACTTTATAATTCTGTTGATTCTATTGACAATGCATTGCCTTCCCCATGTGTTGAGATACGAAGGTTGAAGGAAGGTGACATATTTTTTCTAAAAGGTGAACAAAATGATGAAAAGTCTGTATCATTAGTTCTCCGCATAGCTGATCAGAATGGGCGGGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCCATCTCAGTTTCAAGTGAAATGGTTGAACAACTTGAACTTGCTGAGCAGAATGTTAAATTTATAGCAGAGTTAATTGATTTGCTATTGACAACTTTGCTTCCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTTCTAATGGTAAACTAACTCATTCAAGTAAACAGAAAGACTCAGAATTAGCAAAATACAGGCAAAGCTCAGAAGATTCTAGCCAAATTGTGGCTGAAATTGTAGGTCTCTCAACCTCGCCTGGAAGACCGGCAGAAGTGGAAAACATTGATAATGTGATTTGCGACAAGTTTTTGTCTCATGCAAACATTGGTCTTCGAAGAGAATTAAAGACAGATGATTTGTATTTTGAGAAACATAGGTCATACGCTTCTGCAACATCTGACTTCAATGATAAGCATTTTTCTACAGTTTCATTCATGTCTGCTAAATCAGGATTTACAGACTTTGACCTTCCCAAAGTTAATAGTCAATGCTCGCTTGCATCTGAATTCGGGGCAACATTTGATTATAGCAGTTTTCCTTGTGTGGAAAGCAATGGTACGATGAAATTCTCTAGTCATCCCATTAATGCTTCCTGCTTCTTTCAACCTGGGGATGAGTTGAGAATAGAGTTAGAGAGGATTGAGCAACAATATCAGGATGAAATGGAAGATTTATTGAAAAGAAAAAACCATGACATCATGGAGACTAGAAGGAGGCATTCTTAA
Predicted protein sequences of Glyma06g15610
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g15610.1 sequence type=predicted peptide gene model=Glyma06g15610 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MSLMETESSEEGAGLLEPPDPNVLEIDPTNRYMRYNEVIGQGAFKTVYKAFDEIIGLEVAWSQVQIDEVLQTPGGLERLYSEVHLLKSLKHDSIVTFYNSWIDDKHRTLNLITELFTSGSLRKYSKKHKKVDIKAVKGWAKQILMGLNYLHSHNPPIIHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTTAKSVIGTPEFMAPELYDEHYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPAALSKLKDPEVKSFIEKCLVPASQRLSAKELLKDNFLQVNGSLKNRRLPLPDIVLPKYGTFENRCLMSEGPASTRIRSISMDLGDATELPLTTLLYNSVDSIDNALPSPCVEIRRLKEGDIFFLKGEQNDEKSVSLVLRIADQNGRARNIHFIFYINSDTAISVSSEMVEQLELAEQNVKFIAELIDLLLTTLLPDWKPCVAIDHLVSSNGKLTHSSKQKDSELAKYRQSSEDSSQIVAEIVGLSTSPGRPAEVENIDNVICDKFLSHANIGLRRELKTDDLYFEKHRSYASATSDFNDKHFSTVSFMSAKSGFTDFDLPKVNSQCSLASEFGATFDYSSFPCVESNGTMKFSSHPINASCFFQPGDELRIELERIEQQYQDEMEDLLKRKNHDIMETRRRHS*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
