|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G56310 | AT | Annotation by Michelle Graham. TAIR10: Melibiase family protein | chr3:20882886-20885745 FORWARD LENGTH=437 | SoyBase | E_val: 0 | ISS |
GO:0005975 | GO-bp | Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process | SoyBase | N/A | ISS |
GO:0005990 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lactose catabolic process | SoyBase | N/A | ISS |
GO:0006635 | GO-bp | Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation | SoyBase | N/A | ISS |
GO:0006869 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid transport | SoyBase | N/A | ISS |
GO:0006891 | GO-bp | Annotation by Michelle Graham. GO Biological Process: intra-Golgi vesicle-mediated transport | SoyBase | N/A | ISS |
GO:0007165 | GO-bp | Annotation by Michelle Graham. GO Biological Process: signal transduction | SoyBase | N/A | ISS |
GO:0009311 | GO-bp | Annotation by Michelle Graham. GO Biological Process: oligosaccharide metabolic process | SoyBase | N/A | ISS |
GO:0009755 | GO-bp | Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway | SoyBase | N/A | ISS |
GO:0010351 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lithium ion transport | SoyBase | N/A | ISS |
GO:0016139 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glycoside catabolic process | SoyBase | N/A | ISS |
GO:0016558 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein import into peroxisome matrix | SoyBase | N/A | ISS |
GO:0046477 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glycosylceramide catabolic process | SoyBase | N/A | ISS |
GO:0048767 | GO-bp | Annotation by Michelle Graham. GO Biological Process: root hair elongation | SoyBase | N/A | ISS |
GO:0005576 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: extracellular region | SoyBase | N/A | ISS |
GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
GO:0009505 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall | SoyBase | N/A | ISS |
GO:0003824 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: catalytic activity | SoyBase | N/A | ISS |
GO:0004553 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds | SoyBase | N/A | ISS |
GO:0004557 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: alpha-galactosidase activity | SoyBase | N/A | ISS |
KOG2366 | KOG | Alpha-D-galactosidase (melibiase) | JGI | ISS | |
PTHR11452 | Panther | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE | JGI | ISS | |
PF02065 | PFAM | Melibiase | JGI | ISS | |
UniRef100_I1KB92 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KB92_SOYBN | SoyBase | E_val: 0 | ISS |
UniRef100_Q8VXZ7 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Alpha-galactosidase n=2 Tax=Arabidopsis thaliana RepID=Q8VXZ7_ARATH | SoyBase | E_val: 0 | ISS |
Glyma06g14920 not represented in the dataset |
Glyma06g14920 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.06g144100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g14920.2 sequence type=transcript gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAGTGATTAGACTTAAAATGATGCCATAAGTAATGCATGTCCTTATTATCATTTTTTTCTTTTTTGATGACAAAACAAACCATTTCATTATCAATTGGATTATCAATAACTTTAAGGCCATA >Glyma06g14920.3 sequence type=transcript gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAGAGACCTTCAGCCTTGAAATCATTAAGCGGCAGAAACCTCCAACAGTTCTTTAGCAATTTTAATGCATTCTGTCATGGAGCAATGTCTTATTGCATTTGTTGCTATGTGAGACCTGCTTGCGGCATAACCCTTCTGCTACATGCCAACACAGAAGCCAAGTAAATGTCTGTTTTTTTTTTCTAAAGCTTTAAGGACTAAAACAAAAAACTGGCACAATATAGGTACTAAAGATTAATTAAACTTAATAAAAAATAGGCGTGCAAGAA
>Glyma06g14920.1 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGTACATTTTTGCTCCATTTACAGTATCCCACTCTGTAGAGTAG >Glyma06g14920.2 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAG >Glyma06g14920.3 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAG
>Glyma06g14920.1 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLYIFAPFTVSHSVE* >Glyma06g14920.2 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLISRVSNHAHQ* >Glyma06g14920.3 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQL*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||