Report for Sequence Feature Glyma06g14920
Feature Type: gene_model
Chromosome: Gm06
Start: 11709670
stop: 11717185
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g14920
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G56310 AT
Annotation by Michelle Graham. TAIR10: Melibiase family protein | chr3:20882886-20885745 FORWARD LENGTH=437
SoyBase E_val: 0 ISS
GO:0005975 GO-bp
Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process
SoyBase N/A ISS
GO:0005990 GO-bp
Annotation by Michelle Graham. GO Biological Process: lactose catabolic process
SoyBase N/A ISS
GO:0006635 GO-bp
Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation
SoyBase N/A ISS
GO:0006869 GO-bp
Annotation by Michelle Graham. GO Biological Process: lipid transport
SoyBase N/A ISS
GO:0006891 GO-bp
Annotation by Michelle Graham. GO Biological Process: intra-Golgi vesicle-mediated transport
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0009311 GO-bp
Annotation by Michelle Graham. GO Biological Process: oligosaccharide metabolic process
SoyBase N/A ISS
GO:0009755 GO-bp
Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway
SoyBase N/A ISS
GO:0010351 GO-bp
Annotation by Michelle Graham. GO Biological Process: lithium ion transport
SoyBase N/A ISS
GO:0016139 GO-bp
Annotation by Michelle Graham. GO Biological Process: glycoside catabolic process
SoyBase N/A ISS
GO:0016558 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein import into peroxisome matrix
SoyBase N/A ISS
GO:0046477 GO-bp
Annotation by Michelle Graham. GO Biological Process: glycosylceramide catabolic process
SoyBase N/A ISS
GO:0048767 GO-bp
Annotation by Michelle Graham. GO Biological Process: root hair elongation
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0009505 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall
SoyBase N/A ISS
GO:0003824 GO-mf
Annotation by Michelle Graham. GO Molecular Function: catalytic activity
SoyBase N/A ISS
GO:0004553 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds
SoyBase N/A ISS
GO:0004557 GO-mf
Annotation by Michelle Graham. GO Molecular Function: alpha-galactosidase activity
SoyBase N/A ISS
KOG2366
KOG
Alpha-D-galactosidase (melibiase)
JGI ISS
PTHR11452 Panther
ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
JGI ISS
PF02065 PFAM
Melibiase
JGI ISS
UniRef100_I1KB92 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KB92_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q8VXZ7 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Alpha-galactosidase n=2 Tax=Arabidopsis thaliana RepID=Q8VXZ7_ARATH
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g14920
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma06g14920 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g144100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g14920
Transcripts of Glyma06g14920
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g14920.2 sequence type=transcript gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAGTGATTAGACTTAAAATGATGCCATAAGTAATGCATGTCCTTATTATCATTTTTTTCTTTTTTGATGACAAAACAAACCATTTCATTATCAATTGGATTATCAATAACTTTAAGGCCATA
>Glyma06g14920.3 sequence type=transcript gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAGAGACCTTCAGCCTTGAAATCATTAAGCGGCAGAAACCTCCAACAGTTCTTTAGCAATTTTAATGCATTCTGTCATGGAGCAATGTCTTATTGCATTTGTTGCTATGTGAGACCTGCTTGCGGCATAACCCTTCTGCTACATGCCAACACAGAAGCCAAGTAAATGTCTGTTTTTTTTTTCTAAAGCTTTAAGGACTAAAACAAAAAACTGGCACAATATAGGTACTAAAGATTAATTAAACTTAATAAAAAATAGGCGTGCAAGAA
Coding sequences of Glyma06g14920
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g14920.1 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGTACATTTTTGCTCCATTTACAGTATCCCACTCTGTAGAGTAG
>Glyma06g14920.2 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAG
>Glyma06g14920.3 sequence type=CDS gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAG
Predicted protein sequences of Glyma06g14920
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g14920.1 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLYIFAPFTVSHSVE*
>Glyma06g14920.2 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLISRVSNHAHQ*
>Glyma06g14920.3 sequence type=predicted peptide gene model=Glyma06g14920 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQL*