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Report for Sequence Feature Glyma06g14920

Feature Type:gene_model
Chromosome:Gm06
Start:11709670
stop:11717185
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G56310AT Annotation by Michelle Graham. TAIR10: Melibiase family protein | chr3:20882886-20885745 FORWARD LENGTH=437 SoyBaseE_val: 0ISS
GO:0005975GO-bp Annotation by Michelle Graham. GO Biological Process: carbohydrate metabolic process SoyBaseN/AISS
GO:0005990GO-bp Annotation by Michelle Graham. GO Biological Process: lactose catabolic process SoyBaseN/AISS
GO:0006635GO-bp Annotation by Michelle Graham. GO Biological Process: fatty acid beta-oxidation SoyBaseN/AISS
GO:0006869GO-bp Annotation by Michelle Graham. GO Biological Process: lipid transport SoyBaseN/AISS
GO:0006891GO-bp Annotation by Michelle Graham. GO Biological Process: intra-Golgi vesicle-mediated transport SoyBaseN/AISS
GO:0007165GO-bp Annotation by Michelle Graham. GO Biological Process: signal transduction SoyBaseN/AISS
GO:0009311GO-bp Annotation by Michelle Graham. GO Biological Process: oligosaccharide metabolic process SoyBaseN/AISS
GO:0009755GO-bp Annotation by Michelle Graham. GO Biological Process: hormone-mediated signaling pathway SoyBaseN/AISS
GO:0010351GO-bp Annotation by Michelle Graham. GO Biological Process: lithium ion transport SoyBaseN/AISS
GO:0016139GO-bp Annotation by Michelle Graham. GO Biological Process: glycoside catabolic process SoyBaseN/AISS
GO:0016558GO-bp Annotation by Michelle Graham. GO Biological Process: protein import into peroxisome matrix SoyBaseN/AISS
GO:0046477GO-bp Annotation by Michelle Graham. GO Biological Process: glycosylceramide catabolic process SoyBaseN/AISS
GO:0048767GO-bp Annotation by Michelle Graham. GO Biological Process: root hair elongation SoyBaseN/AISS
GO:0005576GO-cc Annotation by Michelle Graham. GO Cellular Compartment: extracellular region SoyBaseN/AISS
GO:0005773GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuole SoyBaseN/AISS
GO:0009505GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plant-type cell wall SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0004553GO-mf Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds SoyBaseN/AISS
GO:0004557GO-mf Annotation by Michelle Graham. GO Molecular Function: alpha-galactosidase activity SoyBaseN/AISS
KOG2366 KOG Alpha-D-galactosidase (melibiase) JGI ISS
PTHR11452Panther ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE JGI ISS
PF02065PFAM Melibiase JGI ISS
UniRef100_I1KB92UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KB92_SOYBN SoyBaseE_val: 0ISS
UniRef100_Q8VXZ7UniRef Annotation by Michelle Graham. Most informative UniRef hit: Alpha-galactosidase n=2 Tax=Arabidopsis thaliana RepID=Q8VXZ7_ARATH SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g144100 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma06g14920.2   sequence type=transcript   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAGTGATTAGACTTAAAATGATGCCATAAGTAATGCATGTCCTTATTATCATTTTTTTCTTTTTTGATGACAAAACAAACCATTTCATTATCAATTGGATTATCAATAACTTTAAGGCCATA

>Glyma06g14920.3   sequence type=transcript   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TCCGTAAACTCTCTCTCCTTCCTTTCTTACTGTCCAACCAAACTTACATCTTCATATAAATGTGGCAAATCGTGTGAAATGCTTGTCTTCCCGACAGTTCCTACGAATCTCTCTCTCTCTCTCTCTCTCTCCCCCACACACACACACTCTGATGTTTTGGATTTGGCTTAAGTGACTGTGTTCTGTTTCTTCAATTGCACAAATTGTTGGACTTCTAAATTCCATCACTTTGAAGAATAGTGTGATAAGTATTAGGAATAAGAAGCTGCCACTCATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAGAGACCTTCAGCCTTGAAATCATTAAGCGGCAGAAACCTCCAACAGTTCTTTAGCAATTTTAATGCATTCTGTCATGGAGCAATGTCTTATTGCATTTGTTGCTATGTGAGACCTGCTTGCGGCATAACCCTTCTGCTACATGCCAACACAGAAGCCAAGTAAATGTCTGTTTTTTTTTTCTAAAGCTTTAAGGACTAAAACAAAAAACTGGCACAATATAGGTACTAAAGATTAATTAAACTTAATAAAAAATAGGCGTGCAAGAA

>Glyma06g14920.1   sequence type=CDS   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGTACATTTTTGCTCCATTTACAGTATCCCACTCTGTAGAGTAG

>Glyma06g14920.2   sequence type=CDS   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTGATTTCTCGAGTATCAAATCATGCGCATCAATAG

>Glyma06g14920.3   sequence type=CDS   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACGAAGCAGAAAATTCGCAACGCTCTTTTGGTGCACTTGGTGATTCTCTTCTTCTTTTCTACATCGGTTGTTTCAGCGAGAGTTGTGTCTCTCTTGCAGAACTACGGGAACCCGATTTTCAGATCAAATTTTCATTCTATTTACGACACTTCCAAGTACGGTGTGTTTCAACTGAGTAACGGGTTGGGTAAAACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCATGCAATATCAATGAAATGGTCATTAAGGAAACGGCTGATGCACTGGTATCAACGGGGTTGGCTGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTGACAAGAAATCTGAAGGGTCAACTGGTTCCTGATCATAAGACATTTCCATCTGGAATCAAAGCTCTAGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGCATATATTCTGATGCTGGGGTTTTTACATGTCAAGTCCGGCCAGGATCAATTTTCCATGAAACAGATGATGCAGATTTATTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAGAACGATATCCGCCTATGCGTGATGCTCTCAATGCGACTGGGCAGAAGATTTTCTATTCACTCTGTGAATGGGGCGTTGAGGACCCTGCTTTGTGGGCAGACAAGGTTGGTAACAGTTGGCGCACAACTGGAGACATCAATGATTCATGGGCAAGCATGACAACCATTGCTGATCTTAATGATAAGTGGGCTGCATATGCTGGGCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGAGGCATGACTTACCAGGAATATCGTGCTCACTTCAGCATCTGGGCTTTAGCAAAGGCTCCTCTATTGATTGGCTGTGATGTAAGAAATTTGACTGCTGAAACACTTGAGATTTTGAGCAATAAAGAAGTCATTGCCATCAATCAAGACTCTCTTGGAGTCCAGGGAAGGAAAGTTCAAGTTTCTGGAGCAGATGGTTGCAGACAGGTTTGGGCAGGTCCTTTGTCAGGAAACCGATTGGCTGTTGCTCTTTGGAATCGGTGCTCAAAAGTAGCTACTATAACAGCTTCATGGGAAGCACTTGGGCTTGAATCTGGGGTTCATGTTTCTGTGAGGGATTTGTGGCAGCACAAGGTAGTAACTGGAGATGCAGTGTCATCATTCAGTGCTCGAGTTGATATCCACGACTGTCAACTCTAG

>Glyma06g14920.1   sequence type=predicted peptide   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLYIFAPFTVSHSVE*

>Glyma06g14920.2   sequence type=predicted peptide   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQLISRVSNHAHQ*

>Glyma06g14920.3   sequence type=predicted peptide   gene model=Glyma06g14920   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTKQKIRNALLVHLVILFFFSTSVVSARVVSLLQNYGNPIFRSNFHSIYDTSKYGVFQLSNGLGKTPQMGWNSWNFFACNINEMVIKETADALVSTGLADLGYVYVNIDDCWSSVTRNLKGQLVPDHKTFPSGIKALADYVHGKGLKLGIYSDAGVFTCQVRPGSIFHETDDADLFASWGVDYLKYDNCYNLGIPPKERYPPMRDALNATGQKIFYSLCEWGVEDPALWADKVGNSWRTTGDINDSWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNLTAETLEILSNKEVIAINQDSLGVQGRKVQVSGADGCRQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGVHVSVRDLWQHKVVTGDAVSSFSARVDIHDCQL*







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