Report for Sequence Feature Glyma06g13410
Feature Type: gene_model
Chromosome: Gm06
Start: 10553470
stop: 10559396
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g13410
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G24260 AT
Annotation by Michelle Graham. TAIR10: prolyl oligopeptidase family protein | chr5:8234865-8237810 REVERSE LENGTH=746
SoyBase E_val: 0 ISS
GO:0006508 GO-bp
Annotation by Michelle Graham. GO Biological Process: proteolysis
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0008236 GO-mf
Annotation by Michelle Graham. GO Molecular Function: serine-type peptidase activity
SoyBase N/A ISS
KOG2281
KOG
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
JGI ISS
PTHR11731 Panther
PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
JGI ISS
PTHR11731:SF12 Panther
DIPEPTIDYL PEPTIDASE IV
JGI ISS
PF00326 PFAM
Prolyl oligopeptidase family
JGI ISS
PF00930 PFAM
Dipeptidyl peptidase IV (DPP IV) N-terminal region
JGI ISS
UniRef100_G7J6W0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Dipeptidyl peptidase n=1 Tax=Medicago truncatula RepID=G7J6W0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1KAS2 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KAS2_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g13410
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma06g13410
Paralog Evidence Comments
Glyma04g41440 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma06g13410 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g128600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g13410
Coding sequences of Glyma06g13410
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g13410.1 sequence type=CDS gene model=Glyma06g13410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAATGAGAAGAGGAACCCAAAGCGTCAAAAATCACTGCCTTTCAACATGCCTGTGACAGACTCAAATAATCCACAGAATTTTGATGACAACATTCTTTTCCCCGTTGAAGAGATTGTACAATACCCATTGCCTGGATATGTGTCACCGACTTCAATAAGTTTTAGTCCAGATGATAGTTTAATTTCTTATTTATTTAGTCCTGATAACTCTTTAAACAGAAAGGTTTATGCTTTTGATCTGAAGACCTATACACAAGAATTGTTATTCAGTCCCCCTGATGGTGGACTTGATGAAAGTAATATTTCTCCAGAAGAAAAGTTGAGGAGGGAGAGGTTGAGGGAGCGTGGTTTAGGTGTGACACGGTATGAATGGGTGAAGACAAGCTCAAAAAGGAAAGCAGTCATGGTGCCATTGCCTGCTGGGGTTTATATCCAGGACATTCCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTGTATCAGGTTCACCCATTATTGATCCACATCTCTCTCCAGATGGGTCAATGCTTGCCTATGTAAGAGACTGTGAGTTGCATGTTCTGAATCTCTTGTCTAATGAATCAAAGCAGTTGACCCATGGGGCAAAGGAAAATGGTTTGACTCATGGGCTGGCAGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACTGAAGTTGACTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGGAAGAGCTCAGTTGGTTTAGAGGCACAGGAAGACCACTCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTTCGGTAGCTGGAAGCTCCATTACTTGGATGAATCTTCTCTGTGGGGGCACGGAACAGCAAAACAACGAGGAGGAATATTTGGCAAGAGTCAATTGGATGCATGGAAACATTCTCACTGCTCAGATCTTGAACAGGCACCACACTAAAATAAAGATTGTTAAGTTTGATATTAGAACAGGTCAAAGGAAAAATATATTGGTGGAAGAAAACAGCAGTTGGATCAATATACATGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAATTTTCGGGTGGATTTATCTGGGCTAGTGAGAAAACAGGATTTAGACACCTTTATCTTCATGATGCAAACGGGACTTGTTTAGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATTGCCGGAGTGAATGAGGCTACAGGTCTAATATATTTTACTGGGACCTTAGATGGTCCTCTGGAATCCAATTTGTATTGTGCCAAACTTTTTGTTGATGGAAATCAACCACTTCAGGCCCCTATCAGACTTACACACAGCAAGGGGAAGCACATTGTGGTCCTTGATCATCATATGCAAAGTTTTGTTGATATTCATGATTCCCTTGGTTGTCCTCCTAGGGTGTTATTGTGCTCATTGGAAGATGGAAGTGTAATCAAGCCTTTATATGAGCAGTCATTTACAATTCCAAGATTCAAAAAGCTTCAACTTGAGCCACCGGAGATTGTTGAAATACAGGCTAATGATGGCACTACATTGTATGGAGCTCTGTATAAGCCCGATGCTTCAAAGTTTGGACCTCCACCTTACAAAACTATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTTTGTAACTCTTGGCTTAGTACAGTTGATCTGAGAGCACAATATTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAACAGAGGAACTGCGAGACGGGGGTTGAAATTTGAAAGCTATTTAAAACACAAACTTGGTCAAATTGATGCTGATGATCAGCTAACCGGAGCAGAGTGGCTTGTCAAACAAGGGCTTGCAAAAGGTGGTCACATTGGGTTGTACGGATGGAGCTACGGCGGGTATCTCTCTGCCATGACACTGTCAAGATATCCAGATTTCTTCAAGTGTGCAATAGCGGGCGCCCCTGTTACATCATGGGACGGATATGACACGTTTTACACAGAGAAGTACATGGGGTTGCCATCTGAAAACAAGTTGGGATATGAAAGCGGTTCTGTTATGAACCAAGTGCAGCAGTTGAAAGGGCGGTTGTTGCTTGTGCACGGCATGATTGATGAGAATGTTCACTTCAGGCACACTGCAAGACTTATCAATGCACTTGTGGCAGCTGGAAAACCGTATGAGTTAATAGTTTTCCCAGATGAACGTCACATGCCAAGGCGTCATAGCGATCGAGTTTACATGGAAGGGAGGATGTGGGACTTCATTCAGAGGAATCTGTAA
Predicted protein sequences of Glyma06g13410
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g13410.1 sequence type=predicted peptide gene model=Glyma06g13410 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MNEKRNPKRQKSLPFNMPVTDSNNPQNFDDNILFPVEEIVQYPLPGYVSPTSISFSPDDSLISYLFSPDNSLNRKVYAFDLKTYTQELLFSPPDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTSSKRKAVMVPLPAGVYIQDIPHSKAELKLPSVSGSPIIDPHLSPDGSMLAYVRDCELHVLNLLSNESKQLTHGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHSYPFAGASNVKVRLGVVSVAGSSITWMNLLCGGTEQQNNEEEYLARVNWMHGNILTAQILNRHHTKIKIVKFDIRTGQRKNILVEENSSWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGTCLGPITEGEWMVEQIAGVNEATGLIYFTGTLDGPLESNLYCAKLFVDGNQPLQAPIRLTHSKGKHIVVLDHHMQSFVDIHDSLGCPPRVLLCSLEDGSVIKPLYEQSFTIPRFKKLQLEPPEIVEIQANDGTTLYGALYKPDASKFGPPPYKTMINVYGGPSVQLVCNSWLSTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESYLKHKLGQIDADDQLTGAEWLVKQGLAKGGHIGLYGWSYGGYLSAMTLSRYPDFFKCAIAGAPVTSWDGYDTFYTEKYMGLPSENKLGYESGSVMNQVQQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELIVFPDERHMPRRHSDRVYMEGRMWDFIQRNL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
