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Report for Sequence Feature Glyma06g11150

Feature Type:gene_model
Chromosome:Gm06
Start:8508248
stop:8513111
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g11150
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G10180AT Annotation by Michelle Graham. TAIR10: slufate transporter 2;1 | chr5:3193225-3196818 FORWARD LENGTH=677 SoyBaseE_val: 0ISS
GO:0006810GO-bp Annotation by Michelle Graham. GO Biological Process: transport SoyBaseN/AISS
GO:0008272GO-bp Annotation by Michelle Graham. GO Biological Process: sulfate transport SoyBaseN/AISS
GO:0009684GO-bp Annotation by Michelle Graham. GO Biological Process: indoleacetic acid biosynthetic process SoyBaseN/AISS
GO:0019344GO-bp Annotation by Michelle Graham. GO Biological Process: cysteine biosynthetic process SoyBaseN/AISS
GO:0019761GO-bp Annotation by Michelle Graham. GO Biological Process: glucosinolate biosynthetic process SoyBaseN/AISS
GO:0030003GO-bp Annotation by Michelle Graham. GO Biological Process: cellular cation homeostasis SoyBaseN/AISS
GO:0055085GO-bp Annotation by Michelle Graham. GO Biological Process: transmembrane transport SoyBaseN/AISS
GO:0070838GO-bp Annotation by Michelle Graham. GO Biological Process: divalent metal ion transport SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005215GO-mf Annotation by Michelle Graham. GO Molecular Function: transporter activity SoyBaseN/AISS
GO:0008271GO-mf Annotation by Michelle Graham. GO Molecular Function: secondary active sulfate transmembrane transporter activity SoyBaseN/AISS
GO:0015116GO-mf Annotation by Michelle Graham. GO Molecular Function: sulfate transmembrane transporter activity SoyBaseN/AISS
KOG0236 KOG Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) JGI ISS
PTHR11814Panther SULFATE TRANSPORTER JGI ISS
PTHR11814:SF46Panther SUBFAMILY NOT NAMED JGI ISS
PF00916PFAM Sulfate transporter family JGI ISS
PF01740PFAM STAS domain JGI ISS
UniRef100_D4IIB2UniRef Annotation by Michelle Graham. Most informative UniRef hit: Sulphate transporter n=1 Tax=Astragalus drummondii RepID=D4IIB2_9FABA SoyBaseE_val: 0ISS
UniRef100_I1KA21UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KA21_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma06g11150
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g11150 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g106200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g11150
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g11150
>Glyma06g11150.1   sequence type=CDS   gene model=Glyma06g11150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAGTTCAGCTCCCAGTATGAGAGTCAGCGAGCAAGAGCACTTTCATCTTGAGGATACTAGTGACATAGAGAGGTCTATTTGGGTGCTGAATCCTCCCAATCCACCACCTCTTAGGAACAAGCTATTTAGTCCACTGAAGAAAACTGTGTCCTTTTTTTCATCCAAGAAGAAAACTTGCCTTGGACATGCTGTTTCATTCTTGGAGAGTCTATTCCCAATCCTTACATGGTTCACAAATTACAAGGCCTCCAAATTCAAAGAAGATTTGCTAGCCGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCAAAACTTGATCCTCAATATGGTCTATACACCAGTGTTGTTCCTCCACTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATTGCAATTGGGCCTGTAGCTGTAGTTTCATTGCTGCTATCCTCTTTGGTCCCCAAAGTGGTGGATCCTGCTGTTGATCCTGATGCCTACAGGAATGTCGTCTTTACTGTTACCTTATTTGCTGGAATCTTTCAAGCTGCATTTGGTATTTTCAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTTGGATTCATGGCAGGCGCAGCCATCATGATTGGTCTTCAGCAGCTCAAGGGGTTGCTGGGGATTACTCACTTTACCAACAAAACTGATGTAATATCTGTATTGGAATCTGTTTATAAGTCGCTCCACCAACAAATCACATCTGGAGAAAAATGGTACCCTCTGAATTTTGTCATCGGGTGTTCATTCTTGATTTTCCTTTTAATTGCCCGATTTGTTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTTATATTATCAACTTTAATTGTGTATTTATCAAAAGCTGATAAGAATGGGGTTAACATAATAAAGCATGTCAAAGGAGGCTTGAATCCAAGTTCAGTTCAACAGTTACAATTCCATGGTCCACAAGTTGGTCAAGCAGCAAAAATTGGATTGATCTCTGCCGTTATTGCTCTTACTGAAGCAATAGCAGTTGGTCGATCTTTTGCTTCTATTAAAGGATACCATCTTGATGGCAACAAGGAAATGCTAGCAATGGGATGTATGAACATTGCTGGATCGCTCTCTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACTGCAGTAAATTTCAGTGCTGGATGTCAAACATCAGTGTCAAATATTGTGATGGCAGTTACTGTGTTTTTGTGTCTTGAATTGTTTACAAGGCTTCTATACTACACTCCAGTGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTTGCTATATTTGGAAGGTTGACAAATTTGACTTTCTAGCCTGCATTGGTGCTTTCTTGGGGGTCTTGTTTGAATCGGTGGAAATTGGTCTTCTTGTTGCAGTGTCAATCTCATTTGCAAAGATACTAATACAATCAATTCGACCTGGGATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTAGTCAATATCCCATGGCCACAAGCACTCCAGGCATGTTGGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCAAATTTTGTTAGAGAAAGAATACTAAAATGGGTCGCGGAAGAAGAAAACGAGCTTGCTAAGGGAAGAGTCCAAGCAGTAATCTTAGACATGAGCAACCTGATGAATGTTGATACTTCTGGGATTCTAATACTGGAGGAACTGCACAAGAGGTTGCTCTCGCGTGGCGTACAATTGGCTATGGTGAACCCAAGGTGGCTAGTGATTCACAAGCTCAAAGTGGCACATTTTGTGGATAAAATCGGAAGGCAGTGGGTTTTCCTTACTGTTGCTGAAGCCGTAGATGCATGTCTATCTTCTAAATTCCCTGACCCATGA
Predicted protein sequences of Glyma06g11150
>Glyma06g11150.1   sequence type=predicted peptide   gene model=Glyma06g11150   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSSAPSMRVSEQEHFHLEDTSDIERSIWVLNPPNPPPLRNKLFSPLKKTVSFFSSKKKTCLGHAVSFLESLFPILTWFTNYKASKFKEDLLAGLTLASLSIPQSIGYANLAKLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRNVVFTVTLFAGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDVISVLESVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVILSTLIVYLSKADKNGVNIIKHVKGGLNPSSVQQLQFHGPQVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMAVTVFLCLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKFDFLACIGAFLGVLFESVEIGLLVAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMATSTPGMLVIRISSGSLCFANANFVRERILKWVAEEENELAKGRVQAVILDMSNLMNVDTSGILILEELHKRLLSRGVQLAMVNPRWLVIHKLKVAHFVDKIGRQWVFLTVAEAVDACLSSKFPDP*






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