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Report for Sequence Feature Glyma06g09531

Feature Type:gene_model
Chromosome:Gm06
Start:7092659
stop:7093203
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g09531
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G58330AT Annotation by Michelle Graham. TAIR10: transcription factor-related | chr1:21641150-21641827 FORWARD LENGTH=225 SoyBaseE_val: 5.00E-33ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
UniRef100_B9R6R3UniRef Annotation by Michelle Graham. Best UniRef hit: Transcription factor HBP-1b, putative n=1 Tax=Ricinus communis RepID=B9R6R3_RICCO SoyBaseE_val: 9.00E-37ISS
UniRef100_B9R6R3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Transcription factor HBP-1b, putative n=1 Tax=Ricinus communis RepID=B9R6R3_RICCO SoyBaseE_val: 9.00E-37ISS

Expression Patterns of Glyma06g09531
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g09531 not represented in the dataset
Glyma06g09531 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g09531 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g090900 Wm82.a2.v1IGC As supplied by JGI

References for Glyma06g09531
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g09531
>Glyma06g09531.1   sequence type=CDS   gene model=Glyma06g09531   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TGGCGCGCAATGGTCCTCTCTCACTACCAGCAATTTATGGAAGAGAAATCCAACGTGGCAAACGACGACGTTTACCTTCTCTTTTCTCCACCCTGGCTTTCCGCGTACGAAAGGGCTCTCCTCTGGATTGGGGACTACAAGCCCTCTCTAATTCACCGTTTAGTAGACGGCGCCGTGAAGGGGTTAACGGCGGAGCAGAGGGGGAGGGTGGAGAGAACGAGGGACAAGACGAAGAGGGCGGAGAGGGAGCTGACGGAGGCAGTAGCTTCAGTTCAAGAGAGCATGGCGAATAATGGAGCAGGAGCGGCGCTTGAGGGGCTCGGGAAGGCGCTTGAGAAGGTTCTGGAGAGAGCCGATGAGCTTCGCGCGTTGGCCATGAGGAAGGTGGTGGGTATCTTGAGTCCGCCGCGGACGGTGGCGTTGCTGGCGGCGACGATGCACTTTCAGATGAGGGTCAGGATGTGGGGTTTGCAAAGAGCCGAGGTTGGACGGTCTCGTCGTTGA
Predicted protein sequences of Glyma06g09531
>Glyma06g09531.1   sequence type=predicted peptide   gene model=Glyma06g09531   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
WRAMVLSHYQQFMEEKSNVANDDVYLLFSPPWLSAYERALLWIGDYKPSLIHRLVDGAVKGLTAEQRGRVERTRDKTKRAERELTEAVASVQESMANNGAGAALEGLGKALEKVLERADELRALAMRKVVGILSPPRTVALLAATMHFQMRVRMWGLQRAEVGRSRR*






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