Glyma06g09451 - SoyBase

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Report for Sequence Feature Glyma06g09451

Feature Type:	gene_model
Chromosome:	Gm06
Start:	6972696
stop:	6974294
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g09451

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G33770	AT	Annotation by Michelle Graham. TAIR10: phosphate 2 \| chr2:14277785-14281482 REVERSE LENGTH=907	SoyBase	E_val: 3.00E-18	ISS
GO:0006301	GO-bp	Annotation by Michelle Graham. GO Biological Process: postreplication repair	SoyBase	N/A	ISS
GO:0006817	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphate ion transport	SoyBase	N/A	ISS
GO:0016036	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation	SoyBase	N/A	ISS
GO:0055062	GO-bp	Annotation by Michelle Graham. GO Biological Process: phosphate ion homeostasis	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0004842	GO-mf	Annotation by Michelle Graham. GO Molecular Function: ubiquitin-protein ligase activity	SoyBase	N/A	ISS
GO:0016881	GO-mf	Annotation by Michelle Graham. GO Molecular Function: acid-amino acid ligase activity	SoyBase	N/A	ISS
UniRef100_G7IPT0	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Ubiquitin-conjugating enzyme family protein n=1 Tax=Medicago truncatula RepID=G7IPT0_MEDTR	SoyBase	E_val: 1.00E-52	ISS
UniRef100_I1KLJ7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1KLJ7_SOYBN	SoyBase	E_val: 1.00E-107	ISS

Expression Patterns of Glyma06g09451

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g09451 not represented in the dataset	Glyma06g09451 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g09451 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g090000	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g09451

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g09451

Limit To All Plant Sequences

>Glyma06g09451.1   sequence type=CDS   gene model=Glyma06g09451   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTGGAGGTTACATGGGAACCAAATGAGTTATCAGGATGAGTTCCCTGATAATCATTTCATGTCCTGCATTGGCAGCGTTACTGGTTTCCAAGATGGTGATGTGGAGGTTACATGGGCTACTGGTTTCACAACCAAGGTTGCACCTTATGAAATTTTTCGGATTGAGAAACATGAAGGTTCAACTGTAACCCCCACTCCTTATGAGACAAATGTTGAAGAGTTAACTCATGAGATGATTGAACACAGGAGTCTACCTTCTTGTGACAAGAAGGGAAAGGACTTGTTAAATGGTGATGGTACTAGGAAGAATTGTGAAAAGAATCTTGGGGAATGTAGTTCCTTTTCCCTTCCTCGAGCTGCCTTTGAACTTTTCTCCAGCATTAAAGCCAGCATTTTCCAAACTTTTAGTGGAACTCTACTTTCAGGAGCAGTTTCCTCAGTACCTACATTTGAAAAGGAGAATAGATATGGTTATCCAGACAAGAAGGATTCGGAAACTTGTGACCTCTTTAATTGTTTTGCTTAA

Predicted protein sequences of Glyma06g09451

Limit To All Plant Sequences

>Glyma06g09451.1   sequence type=predicted peptide   gene model=Glyma06g09451   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MWRLHGNQMSYQDEFPDNHFMSCIGSVTGFQDGDVEVTWATGFTTKVAPYEIFRIEKHEGSTVTPTPYETNVEELTHEMIEHRSLPSCDKKGKDLLNGDGTRKNCEKNLGECSSFSLPRAAFELFSSIKASIFQTFSGTLLSGAVSSVPTFEKENRYGYPDKKDSETCDLFNCFA*

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