Glyma06g07591 - SoyBase

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Report for Sequence Feature Glyma06g07591

Feature Type:	gene_model
Chromosome:	Gm06
Start:	5543440
stop:	5543859
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g07591

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
PF00931	PFAM	NB-ARC domain	JGI		ISS
UniRef100_B9SQA5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Disease resistance protein RFL1, putative n=1 Tax=Ricinus communis RepID=B9SQA5_RICCO	SoyBase	E_val: 2.00E-22	ISS
UniRef100_I1KSH1	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1KSH1_SOYBN	SoyBase	E_val: 9.00E-44	ISS

Expression Patterns of Glyma06g07591

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g07591 not represented in the dataset	Glyma06g07591 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma06g07591

Paralog	Evidence	Comments
Glyma04g07470	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma06g07591 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g072300	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g07591

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma06g07591

Limit To All Plant Sequences

>Glyma06g07591.1   sequence type=CDS   gene model=Glyma06g07591   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGCTCTGAGTCAACCAAATATTATCATACTTTGGATGCATGGATCAAGTAATGCGAGAAAGGGCAACGTGGTGGAGAAAATCACGAGGAGAGTTCAGAGGGACCAGCTGTTTGATTTGGTTGTGATGTCAAGTGTGAGGAAAAAGCCCGACTTAAGAAGAATTCAAGAGAAAACTCTGGAGGGAAGAGCTACCTGTTTGTGCAATAGGATAAAGATGGAAGAGAAGATCCTTATCATCCTAAATGATCTTTGGGGTGCAATCAACTTGGGTAAGATAGGAATTCCATTTGGAAACGATCAGAAGGGGTGTAAAATTTTGCTAGTATCTTCTCATAATCAAGGTGTTGTTGTCCAACCAAATGAAAACCCAAATAGAAGTTTGTGTGAGTCTTCAGATGGCCGCAGGTTAAAGAATTAA

Predicted protein sequences of Glyma06g07591

Limit To All Plant Sequences

>Glyma06g07591.1   sequence type=predicted peptide   gene model=Glyma06g07591   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MALSQPNIIILWMHGSSNARKGNVVEKITRRVQRDQLFDLVVMSSVRKKPDLRRIQEKTLEGRATCLCNRIKMEEKILIILNDLWGAINLGKIGIPFGNDQKGCKILLVSSHNQGVVVQPNENPNRSLCESSDGRRLKN*

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