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Report for Sequence Feature Glyma06g06231

Feature Type:gene_model
Chromosome:Gm06
Start:4458284
stop:4462840
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma06g06231
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G10730AT Annotation by Michelle Graham. TAIR10: NAD(P)-binding Rossmann-fold superfamily protein | chr5:3390822-3392947 REVERSE LENGTH=287 SoyBaseE_val: 3.00E-29ISS
GO:0044237GO-bp Annotation by Michelle Graham. GO Biological Process: cellular metabolic process SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0000166GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleotide binding SoyBaseN/AISS
GO:0003824GO-mf Annotation by Michelle Graham. GO Molecular Function: catalytic activity SoyBaseN/AISS
GO:0050662GO-mf Annotation by Michelle Graham. GO Molecular Function: coenzyme binding SoyBaseN/AISS
PTHR12126Panther NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED JGI ISS
PTHR12126:SF2Panther UNCHARACTERIZED JGI ISS
UniRef100_I1K8J8UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K8J8_SOYBN SoyBaseE_val: 2.00E-54ISS
UniRef100_Q93VH5UniRef Annotation by Michelle Graham. Most informative UniRef hit: AT5g10730/MAJ23_90 n=1 Tax=Arabidopsis thaliana RepID=Q93VH5_ARATH SoyBaseE_val: 1.00E-26ISS

Expression Patterns of Glyma06g06231
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g06231 not represented in the dataset
Glyma06g06231 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma06g06231 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma06g06231
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma06g06231
>Glyma06g06231.1   sequence type=CDS   gene model=Glyma06g06231   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAGAGAGCTGCTGAAACAGAGCTTCTGAACAGATTTCCATTTGGAGGAGTAATTCTGAGGCCAGGATTTTTTTATGGGACTCGAAGAGTTGGATCTCCATTGGAAATGGTTCTCCCACCACTTGTTGGGCCTCTGATGACGACAGCTCCTGTCAATGTTACTGCGGTGGCAAAAGTTGCTGTTACAGCTGCTACTGCTACTGATCCTGTATTTCCCCCGGGGATCATTGATGCCTATGGAATACAACGTTTACTGTCAGAATATATCTAA
Predicted protein sequences of Glyma06g06231
>Glyma06g06231.1   sequence type=predicted peptide   gene model=Glyma06g06231   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQRAAETELLNRFPFGGVILRPGFFYGTRRVGSPLEMVLPPLVGPLMTTAPVNVTAVAKVAVTAATATDPVFPPGIIDAYGIQRLLSEYI*






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