Glyma06g05280 - SoyBase

SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

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Report for Sequence Feature Glyma06g05280

Feature Type:	gene_model
Chromosome:	Gm06
Start:	3764456
stop:	3772188
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma06g05280

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G10070	AT	Annotation by Michelle Graham. TAIR10: branched-chain amino acid transaminase 2 \| chr1:3288255-3290164 FORWARD LENGTH=388	SoyBase	E_val: 0	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0009081	GO-bp	Annotation by Michelle Graham. GO Biological Process: branched-chain amino acid metabolic process	SoyBase	N/A	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0009744	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to sucrose stimulus	SoyBase	N/A	ISS
GO:0009750	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to fructose stimulus	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005739	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion	SoyBase	N/A	ISS
GO:0009507	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: chloroplast	SoyBase	N/A	ISS
GO:0003824	GO-mf	Annotation by Michelle Graham. GO Molecular Function: catalytic activity	SoyBase	N/A	ISS
GO:0004084	GO-mf	Annotation by Michelle Graham. GO Molecular Function: branched-chain-amino-acid transaminase activity	SoyBase	N/A	ISS
KOG0975	KOG	Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily	JGI		ISS
PTHR11825	Panther	SUBGROUP IIII AMINOTRANSFERASE	JGI		ISS
PTHR11825:SF2	Panther	BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE	JGI		ISS
PF01063	PFAM	Aminotransferase class IV	JGI		ISS
UniRef100_C6TLT9	UniRef	Annotation by Michelle Graham. Best UniRef hit: Branched-chain-amino-acid aminotransferase n=3 Tax=Glycine max RepID=C6TLT9_SOYBN	SoyBase	E_val: 0	ISS
UniRef100_C6TLT9	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Branched-chain-amino-acid aminotransferase n=3 Tax=Glycine max RepID=C6TLT9_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma06g05280

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma06g05280 not represented in the dataset	Glyma06g05280 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma06g05280

Paralog	Evidence	Comments
Glyma04g05190	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma06g05280 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.06g050100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma06g05280

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma06g05280

Limit To All Plant Sequences

>Glyma06g05280.2   sequence type=transcript   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
GTATTGTTGTTGAAATCTGAAAACAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAACAACGAGTGTTTATAATTTATAATTGTTTATTCCAATGTTATTAAACCAATTTTAAACTGTAATAATGATTGCCCATACGAAAAATGGCGCATATACTGTTGTTCGTTATCTAAAAGCATGTTATATGTGTAAAATGTTTTTTTTGGATACATATATATGTAAAATGATGTGCACATTATAAATTATAATGATTATATAAAGTAAAGGACTTGCAAATCATATTCCGAG

>Glyma06g05280.4   sequence type=transcript   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCTAACATTAATATAAAATTGAAAATAATGTTTTCTATATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAACAACGAGTGTTTATAATTTATAATTGTTTATTCCAATGTTATTAAACCAATTTTAAACTGTAATAATGATTGCCCATACGAAAAATGGCGCATATACTGTTGTTCGTTATCTAAAAGCATGTTATATGTGTAAAATGTTTTTTTTGGATACATATATATGTAAAATGATGTGCACATTATAAATTATAATGATTATATAAAGTAAAGGACTTGCAAATCATATTCCGAGAAAAATTTGAGTTCGAAA

>Glyma06g05280.6   sequence type=transcript   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCTAACATTAATATAAAATTGAAAATAATGTTTTCTATATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAACAACGAGTGTTTATAATTTATAATTGTTTATTCCAATGTTATTAAACCAATTTTAAACTGTAATAATGATTGCCCATACGAAAAATGGCGCATATACTGTTGTTCGTTATCTAAAAGCATGTTATATGTGTAAAATGTTTTTTTTGGATACATATATATGTAAAATGATGTGCACATTATAAATTATAATGATTATATAAAGTAAAGGACTTGCAAATCATATTCCGAGAAAAATTTGAGTTCGAAA

>Glyma06g05280.7   sequence type=transcript   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
CCTAACATTAATATAAAATTGAAAATAATGTTTTCTATATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAACAACGAGTGTTTATAATTTATAATTGTTTATTCCAATGTTATTAAACCAATTTTAAACTGTAATAATGATTGCCCATACGAAAAATGGCGCATATACTGTTGTTCGTTATCTAAAAGCATGTTATATGTGTAAAATGTTTTTTTTGGATACATATATATGTAAAATGATGTGCACATTATAAATTATAATGATTATATAAAGTAAAGGACTTGCAAATCATATTCCGAGAAAAATTTGAGTTCGAAA

Coding sequences of Glyma06g05280

Limit To All Plant Sequences

>Glyma06g05280.1   sequence type=CDS   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAA

>Glyma06g05280.2   sequence type=CDS   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAA

>Glyma06g05280.4   sequence type=CDS   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAA

>Glyma06g05280.6   sequence type=CDS   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGTAGAAGAGCGTGCTGTTGCCGTGGATGAATTGATTGAGGCTGATGAAGTTTTCTGCACAGGAACTGCGGTCGGTGTTGCTCCAGTAGGGAGTATCACATACCAGGATAAAAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGAAGATAAGAAGGGATGGATTGTCGAAGTTGATTAA

>Glyma06g05280.7   sequence type=CDS   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAATGTTCCAAAAAGGAGCAAAACACTCGAGGTTGTATAAATGGCTATTCAGATTGTAGAGCTGGCGTTGCCCGTTACTCCTCCTATCTATCGTGCGTATCTCTTTCTCTCTCCATTTTTATTTATATATTTCTCTCCATTATTTGGTGTGCATGCTCTAGACACACACACACCCCACCACCACCAACACTGAGTTTTAGCAGAAGGATAGAGAGCAGAATGATTCAAAGAACTGTGTCCTTTCCCAGTTTAAGGAAATTGCTTCTTCGGGCTGGTTGTTCTAAATCTGCTTCGTCCAAGATCGGAACTTACAATTGCTTTGCTTCTCAGTCCTCCCCTCTACCGAGCCACAACCCTAGTTACCGTGATGACGAGTATGCTGATGTGGACTGGGACAGTCTTGGATTTGGACTGATGCCCACTGATTATATGTATATTACTAAATGTTGTGAGGGCCAAAATTTTGGACAAGGACAACTCAGTCGTTATGGGAACATTGAACTCAGTCCATCAGCTGGTGTCCTAAATTATGGTCAGGGTTTATTCGAAGGCACGAAAGCATACAGAAAAGAAAATGGGGGCTTGCTACTCTTCCGTCCAGAAGAAAATGCCATTCGCATGAAGACTGGTGCCCAAAGAATGTGCATGGCATCGCCTTCCATTGATCATTTTGTTGATGCTTTGAAGCAAACTGTCTTGGCTAATAAGCGTTGGGTTCCTCCACCGGGCAAAGGATCCTTGTACCTTAGGCCTCTGCTCCTAGGAACTGGTCCGGTTTTGGGTTTGGCTCCTGCACCTGAATACACATTCCTCATATTTGCTTCCCCTGTTCGCAACTATTTCAAGGAGGGCTCTGCTCCACTCAACTTGTACGTGGAGGAAAACTTTGACCGTGCTTCTAGCCGCGGCACTGGAAACGTTAAAACCATTTCCAATTATGCACCGGTCTTGATGGCACAAATTCAAGCCAAGAAAAGAGGATTTTCGGATGTGCTATACCTTGATTCAGACACCAAGAAAAATCTCGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGGCAAATGCATCTCAACACCTGCTACTAATGGAACTATTCTTTCCGGAATTACCCGAAAAAGTGTCATTGAAATTGCTCGCGATCATGGCTATCAGGATGGAATATATAACAGGTTCTGGAACCATTTGTCAAGAGCTGAACAATACCATTTCAGGAATTCAAACGGGTACTATTGA

Predicted protein sequences of Glyma06g05280

Limit To All Plant Sequences

>Glyma06g05280.1   sequence type=predicted peptide   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQCSKKEQNTRGCINGYSDCRAGVARYSSYLSLRKLLLRAGCSKSASSKIGTYNCFASQSSPLPSHNPSYRDDEYADVDWDSLGFGLMPTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERAVAVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD*

>Glyma06g05280.2   sequence type=predicted peptide   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERAVAVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD*

>Glyma06g05280.4   sequence type=predicted peptide   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MPTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERAVAVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD*

>Glyma06g05280.6   sequence type=predicted peptide   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQCSKKEQNTRGCINGYSDCRAGVARYSSYLSCVSLSLSIFIYIFLSIIWCACSRHTHTPPPPTLSFSRRIESRMIQRTVSFPSLRKLLLRAGCSKSASSKIGTYNCFASQSSPLPSHNPSYRDDEYADVDWDSLGFGLMPTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQVEERAVAVDELIEADEVFCTGTAVGVAPVGSITYQDKRMEYITGSGTICQELNNTISGIQTGTIEDKKGWIVEVD*

>Glyma06g05280.7   sequence type=predicted peptide   gene model=Glyma06g05280   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQCSKKEQNTRGCINGYSDCRAGVARYSSYLSCVSLSLSIFIYIFLSIIWCACSRHTHTPPPPTLSFSRRIESRMIQRTVSFPSLRKLLLRAGCSKSASSKIGTYNCFASQSSPLPSHNPSYRDDEYADVDWDSLGFGLMPTDYMYITKCCEGQNFGQGQLSRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGGLLLFRPEENAIRMKTGAQRMCMASPSIDHFVDALKQTVLANKRWVPPPGKGSLYLRPLLLGTGPVLGLAPAPEYTFLIFASPVRNYFKEGSAPLNLYVEENFDRASSRGTGNVKTISNYAPVLMAQIQAKKRGFSDVLYLDSDTKKNLEEVSSCNIFIAKGKCISTPATNGTILSGITRKSVIEIARDHGYQDGIYNRFWNHLSRAEQYHFRNSNGYY*

Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA

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