|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G33430 | AT | Annotation by Michelle Graham. TAIR10: differentiation and greening-like 1 | chr2:14162732-14164729 FORWARD LENGTH=219 | SoyBase | E_val: 3.00E-16 | ISS |
GO:0000478 | GO-bp | Annotation by Michelle Graham. GO Biological Process: endonucleolytic cleavage involved in rRNA processing | SoyBase | N/A | ISS |
GO:0002103 | GO-bp | Annotation by Michelle Graham. GO Biological Process: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | SoyBase | N/A | ISS |
GO:0006364 | GO-bp | Annotation by Michelle Graham. GO Biological Process: rRNA processing | SoyBase | N/A | ISS |
GO:0006399 | GO-bp | Annotation by Michelle Graham. GO Biological Process: tRNA metabolic process | SoyBase | N/A | ISS |
GO:0009657 | GO-bp | Annotation by Michelle Graham. GO Biological Process: plastid organization | SoyBase | N/A | ISS |
GO:0009658 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chloroplast organization | SoyBase | N/A | ISS |
GO:0009902 | GO-bp | Annotation by Michelle Graham. GO Biological Process: chloroplast relocation | SoyBase | N/A | ISS |
GO:0009965 | GO-bp | Annotation by Michelle Graham. GO Biological Process: leaf morphogenesis | SoyBase | N/A | ISS |
GO:0010027 | GO-bp | Annotation by Michelle Graham. GO Biological Process: thylakoid membrane organization | SoyBase | N/A | ISS |
GO:0010207 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photosystem II assembly | SoyBase | N/A | ISS |
GO:0030154 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell differentiation | SoyBase | N/A | ISS |
GO:0034660 | GO-bp | Annotation by Michelle Graham. GO Biological Process: ncRNA metabolic process | SoyBase | N/A | ISS |
GO:0035304 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of protein dephosphorylation | SoyBase | N/A | ISS |
GO:0042793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transcription from plastid promoter | SoyBase | N/A | ISS |
GO:0045893 | GO-bp | Annotation by Michelle Graham. GO Biological Process: positive regulation of transcription, DNA-dependent | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0003674 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: molecular function | SoyBase | N/A | ISS |
UniRef100_I1K842 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K842_SOYBN | SoyBase | E_val: 5.00E-33 | ISS |
UniRef100_Q01HT4 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: B0403H10-OSIGBa0105A11.14 protein n=3 Tax=Oryza sativa RepID=Q01HT4_ORYSA | SoyBase | E_val: 9.00E-14 | ISS |
Glyma06g04751 not represented in the dataset |
Glyma06g04751 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g04751.1 sequence type=CDS gene model=Glyma06g04751 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGGTGTCGCTGTTCAAGGGCTGTGACTACCATCATTGGCTCGTCGTCATCCATGAGTCCGCCGGCAAAGGCTGCACCAAGCCACAAATGATTGATTGCTACATTCAAACCCTCGCCAAGGTTCTTGGAAGTTCAAGTTCCCCCCCTCTAGTTCTTCCAAATTCAAGATTTGTTCTGAGATTTTTGTTGTTTCCGTTTTTATCAAGTTTTTGTTTCCATGGTTTTGGAGGTAGAAGAATAGGAAAAGAATGTGTTGATGTCGCGGTGGGTTCTTACATGGTGTTGTCAAAGGAGTCTACAGGGTGTTGTGAATTGGGGCATGATGCAGGTTGGTTCTTACAGAACTTTTATCAGACATTTGGTGAGCACTGGAATAACGACTAA
>Glyma06g04751.1 sequence type=predicted peptide gene model=Glyma06g04751 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MVSLFKGCDYHHWLVVIHESAGKGCTKPQMIDCYIQTLAKVLGSSSSPPLVLPNSRFVLRFLLFPFLSSFCFHGFGGRRIGKECVDVAVGSYMVLSKESTGCCELGHDAGWFLQNFYQTFGEHWNND*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||