Report for Sequence Feature Glyma06g01750
Feature Type: gene_model
Chromosome: Gm06
Start: 1109760
stop: 1115258
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma06g01750
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G35300 AT
Annotation by Michelle Graham. TAIR10: tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=739
SoyBase E_val: 0 ISS
GO:0006810 GO-bp
Annotation by Michelle Graham. GO Biological Process: transport
SoyBase N/A ISS
GO:0055085 GO-bp
Annotation by Michelle Graham. GO Biological Process: transmembrane transport
SoyBase N/A ISS
GO:0005773 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuole
SoyBase N/A ISS
GO:0005774 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane
SoyBase N/A ISS
GO:0005794 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus
SoyBase N/A ISS
GO:0016020 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: membrane
SoyBase N/A ISS
GO:0016021 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane
SoyBase N/A ISS
GO:0005215 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transporter activity
SoyBase N/A ISS
GO:0005337 GO-mf
Annotation by Michelle Graham. GO Molecular Function: nucleoside transmembrane transporter activity
SoyBase N/A ISS
GO:0005351 GO-mf
Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity
SoyBase N/A ISS
GO:0015144 GO-mf
Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity
SoyBase N/A ISS
GO:0022857 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transmembrane transporter activity
SoyBase N/A ISS
KOG0569
KOG
Permease of the major facilitator superfamily
JGI ISS
PTHR24063 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24063:SF85 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00083 PFAM
Sugar (and other) transporter
JGI ISS
UniRef100_G7J6G0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Monosaccharide-sensing protein n=2 Tax=Medicago truncatula RepID=G7J6G0_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1K797 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K797_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma06g01750
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma06g01750
Paralog Evidence Comments
Glyma04g01660 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma06g01750 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.06g015000 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma06g01750
Transcripts of Glyma06g01750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g01750.3 sequence type=transcript gene model=Glyma06g01750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
AATTTGTCCGTTCGGCTATGCCATGCCAACGGCGAAAGACAAATAGCGTAGAATATTAGAATACAGAAAGAACAACCAAAAAAATCGAATATATATAATGCAAGAAAGGTTGGAGGGTTTTGAGGTGTCTGAAGAAGGAAAAATTTGTTCCACTTTCGAGAATTCACAGTCACCGCCTCAAGTAAAATTATTTAATTCAATTTGGCCAGATCATTTGATTCCAAACTAGATTTTTTTTTTTTTGGCTATCTTCTTTAATACGTACGTAGTAGTGTAAGATATATAATCGATTAGAGAAATGGGTGATGATTTCAGGGTTGACGATTGTTTAGCGCATCAGTGTTTGTTCATAATTGGAGTGATCTGGCACTGGCTGGACCCCTTTTTGTCCTCATACAGATTCCATCTATGAATCACTCCAACCATCTACTTCATACTCTATCACTAGATTCACTCTTTCTTTTTTCTTTTACCATCATTTATAAAATACAGTGACTCTAGAACCCAACAAGTACAAGAGAAGTGACTCGTTGCTTAACCCTTGTTGAGTGAGTGAGCAAGGGGAATGGCGATCTGAAATTTCGGATACTTTAATTGCTTCTCGCTTTCACCGACCGAACTCAATTTATAGATACTCCGTCAACCTCAATCCCAACTAACTAGCAGTTCCTTGCTGCTGCTCCTTCTTCACCATATCGCAGTAATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGACACAACACAAGTCGTTATATACTCTGTAACTTTAGTGGCTAAAGCCATCATCTCTTGTCTTCACAGATTTTGCTTGTCATAAGTTTATTTGGAGGAAGATATGTTGAAACATATGGATGTATTATTCTTTCATAAATATAAAATTTTGCATTTTTAGAGTGAAAATAGCCTGTTGGATTAATCCACTTTAGGAGTATGAACGCCTTTGATGAAAAG
Coding sequences of Glyma06g01750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma06g01750.2 sequence type=CDS gene model=Glyma06g01750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGA
>Glyma06g01750.3 sequence type=CDS gene model=Glyma06g01750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGA
Predicted protein sequences of Glyma06g01750
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma06g01750.2 sequence type=predicted peptide gene model=Glyma06g01750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALETTMEGLVVAMSLIGATVITTCSGPVADWLGRRPMMIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADKVADGHEHATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAADGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSILGSMRRHSSLMQGSGEQGGSTGIGGGWQLAWKWTDKDEDGKHQGGFKRIYLHEEGVSASHRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGVAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGAKQAASAKNE*
>Glyma06g01750.3 sequence type=predicted peptide gene model=Glyma06g01750 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALETTMEGLVVAMSLIGATVITTCSGPVADWLGRRPMMIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADKVADGHEHATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAADGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSILGSMRRHSSLMQGSGEQGGSTGIGGGWQLAWKWTDKDEDGKHQGGFKRIYLHEEGVSASHRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGVAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGAKQAASAKNE*