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Report for Sequence Feature Glyma06g01750

Feature Type:gene_model
Chromosome:Gm06
Start:1109760
stop:1115258
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35300AT Annotation by Michelle Graham. TAIR10: tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=739 SoyBaseE_val: 0ISS
GO:0006810GO-bp Annotation by Michelle Graham. GO Biological Process: transport SoyBaseN/AISS
GO:0055085GO-bp Annotation by Michelle Graham. GO Biological Process: transmembrane transport SoyBaseN/AISS
GO:0005773GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuole SoyBaseN/AISS
GO:0005774GO-cc Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane SoyBaseN/AISS
GO:0005794GO-cc Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0016021GO-cc Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane SoyBaseN/AISS
GO:0005215GO-mf Annotation by Michelle Graham. GO Molecular Function: transporter activity SoyBaseN/AISS
GO:0005337GO-mf Annotation by Michelle Graham. GO Molecular Function: nucleoside transmembrane transporter activity SoyBaseN/AISS
GO:0005351GO-mf Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity SoyBaseN/AISS
GO:0015144GO-mf Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity SoyBaseN/AISS
GO:0022857GO-mf Annotation by Michelle Graham. GO Molecular Function: transmembrane transporter activity SoyBaseN/AISS
KOG0569 KOG Permease of the major facilitator superfamily JGI ISS
PTHR24063Panther FAMILY NOT NAMED JGI ISS
PTHR24063:SF85Panther SUBFAMILY NOT NAMED JGI ISS
PF00083PFAM Sugar (and other) transporter JGI ISS
UniRef100_G7J6G0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Monosaccharide-sensing protein n=2 Tax=Medicago truncatula RepID=G7J6G0_MEDTR SoyBaseE_val: 0ISS
UniRef100_I1K797UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K797_SOYBN SoyBaseE_val: 0ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

ParalogEvidenceComments
Glyma04g01660 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g015000 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma06g01750.3   sequence type=transcript   gene model=Glyma06g01750   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
AATTTGTCCGTTCGGCTATGCCATGCCAACGGCGAAAGACAAATAGCGTAGAATATTAGAATACAGAAAGAACAACCAAAAAAATCGAATATATATAATGCAAGAAAGGTTGGAGGGTTTTGAGGTGTCTGAAGAAGGAAAAATTTGTTCCACTTTCGAGAATTCACAGTCACCGCCTCAAGTAAAATTATTTAATTCAATTTGGCCAGATCATTTGATTCCAAACTAGATTTTTTTTTTTTTGGCTATCTTCTTTAATACGTACGTAGTAGTGTAAGATATATAATCGATTAGAGAAATGGGTGATGATTTCAGGGTTGACGATTGTTTAGCGCATCAGTGTTTGTTCATAATTGGAGTGATCTGGCACTGGCTGGACCCCTTTTTGTCCTCATACAGATTCCATCTATGAATCACTCCAACCATCTACTTCATACTCTATCACTAGATTCACTCTTTCTTTTTTCTTTTACCATCATTTATAAAATACAGTGACTCTAGAACCCAACAAGTACAAGAGAAGTGACTCGTTGCTTAACCCTTGTTGAGTGAGTGAGCAAGGGGAATGGCGATCTGAAATTTCGGATACTTTAATTGCTTCTCGCTTTCACCGACCGAACTCAATTTATAGATACTCCGTCAACCTCAATCCCAACTAACTAGCAGTTCCTTGCTGCTGCTCCTTCTTCACCATATCGCAGTAATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGACACAACACAAGTCGTTATATACTCTGTAACTTTAGTGGCTAAAGCCATCATCTCTTGTCTTCACAGATTTTGCTTGTCATAAGTTTATTTGGAGGAAGATATGTTGAAACATATGGATGTATTATTCTTTCATAAATATAAAATTTTGCATTTTTAGAGTGAAAATAGCCTGTTGGATTAATCCACTTTAGGAGTATGAACGCCTTTGATGAAAAG

>Glyma06g01750.2   sequence type=CDS   gene model=Glyma06g01750   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGA

>Glyma06g01750.3   sequence type=CDS   gene model=Glyma06g01750   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGAAAGGTGCCGTCCTTGTTGCTATTGCCGCTTCCATTGGTAATTTCCTCCAGGGATGGGATAATGCTACCATCGCCGGGGCTATTGTTTACATTAAGAAAGACCTTGCTTTGGAAACAACTATGGAAGGGCTTGTGGTGGCCATGTCCCTGATTGGGGCAACGGTAATCACCACATGCTCTGGTCCCGTAGCCGATTGGCTCGGTCGACGACCCATGATGATAATCTCATCTGTGCTCTATTTCTTGGGTGGTTTGGTGATGCTGTGGTCCCCAAATGTGTATGTGTTGTGCCTAGCGAGGCTACTTGATGGATTTGGGATTGGGCTTGCTGTGACCCTTGTCCCGGTCTATATATCTGAAACAGCGCCGTCTGAGATAAGAGGGTCGTTGAACACGCTTCCTCAGTTCAGTGGCTCTGGTGGAATGTTTTTGTCCTACTGTATGGTTTTTGGCATGTCATTGAGTCCCGCCCCTAGCTGGAGGCTCATGCTTGGGGTTCTGTCTATTCCTTCGCTCTTGTATTTTGCATTGACCATTTTTTTCTTGCCCGAGTCTCCTCGCTGGCTGGTCAGCAAAGGAAGGATGCTCGAGGCTAAGAAAGTGCTCCAAAGATTGCGCGGACGGGAGGATGTGTCGGGCGAGATGGCGTTGCTGGTTGAAGGTCTCGGGATTGGGGGTGATACATCTATAGAAGAGTACATAATTGGCCCTGCTGACAAGGTGGCTGATGGTCATGAACATGCAACAGAGAAAGATAAAATTCGATTATATGGATCCCAAGCAGGCCTCTCTTGGTTAGCAAAACCTGTCACTGGACAGAGTTCTATTGGCCTTGCATCACGCCATGGAAGCATCATCAACCAAAGCATGCCACTCATGGATCCTCTAGTGACACTGTTTGGTAGCATTCATGAGAAGCTCCCCGAGACAGGAGCAGGAGGAAGCATGCGAAGCACTCTGTTTCCAAATTTTGGAAGCATGTTCAGCACAGCTGAGCCGCATGTTAAAAATGAACAGTGGGATGAAGAGAGCTTACAAAGGGAAGGTGAGGACTACATGTCAGATGCAGCTGATGGGGACTCTGATGATAATTTGCATAGTCCTTTAATCTCACGTCAAACAACAAGCCTTGAAAAAGACTTGCCTCCCCCTCCTTCCCATGGCAGTATCCTAGGCAGCATGAGGCGTCACAGTAGTCTCATGCAAGGGTCAGGTGAGCAAGGTGGTAGTACAGGCATTGGTGGTGGCTGGCAACTTGCATGGAAATGGACTGATAAAGATGAGGATGGAAAACATCAAGGAGGGTTTAAAAGGATTTATTTACATGAGGAGGGAGTTTCTGCATCTCATCGTGGATCCATTGTATCAATTCCTGGTGAAGGTGAATTTGTCCAGGCTGCTGCCTTAGTAAGCCAACCTGCTCTTTACTCCAAGGAGCTTATCGATGGACATCCAGTTGGGCCTGCAATGGTTCACCCATCTGAGACCGCTTCAAAAGGGCCAAGTTGGAAAGCTCTTCTTGAACCAGGGGTTAAGCATGCATTGATTGTTGGAGTTGGAATACAAATACTTCAGCAGTTTTCAGGGATAAATGGGGTTCTATATTACACACCTCAAATCCTTGAAGAGGCTGGTGTTGAAGTTCTTCTTTCAGATATAGGCATTGGCTCAGAGTCTGCATCATTCCTTATCAGTGCTTTCACAACCTTCTTGATGCTTCCATGTATAGGCGTAGCCATGAAGCTCATGGATGTTTCAGGCAGAAGGCAGTTGCTACTTACTACAATCCCCGTGTTGATTGTGTCACTCATTATTTTGGTCATTGGAAGCCTGGTAAATTTTGGGAATGTTGCCCATGCAGCAATCTCAACAGTATGCGTTGTGGTTTATTTCTGCTGCTTTGTGATGGGTTATGGACCAATTCCAAACATCCTTTGCTCAGAGATTTTCCCCACTAGAGTGCGTGGCCTCTGCATTGCTATCTGTGCATTAGTATTCTGGATTGGAGACATCATCATCACATATTCGCTGCCTGTGATGCTCAGCTCTTTAGGACTTGGTGGTGTATTCGCCATTTACGCAGTTGTTTGTTTCATCTCGTGGATATTTGTGTTTTTGAAGGTTCCAGAAACAAAGGGCATGCCCCTTGAAGTCATCTCTGAATTCTTTTCTGTTGGTGCAAAGCAGGCTGCTTCTGCCAAGAACGAGTGA

>Glyma06g01750.2   sequence type=predicted peptide   gene model=Glyma06g01750   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALETTMEGLVVAMSLIGATVITTCSGPVADWLGRRPMMIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADKVADGHEHATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAADGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSILGSMRRHSSLMQGSGEQGGSTGIGGGWQLAWKWTDKDEDGKHQGGFKRIYLHEEGVSASHRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGVAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGAKQAASAKNE*

>Glyma06g01750.3   sequence type=predicted peptide   gene model=Glyma06g01750   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MKGAVLVAIAASIGNFLQGWDNATIAGAIVYIKKDLALETTMEGLVVAMSLIGATVITTCSGPVADWLGRRPMMIISSVLYFLGGLVMLWSPNVYVLCLARLLDGFGIGLAVTLVPVYISETAPSEIRGSLNTLPQFSGSGGMFLSYCMVFGMSLSPAPSWRLMLGVLSIPSLLYFALTIFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGIGGDTSIEEYIIGPADKVADGHEHATEKDKIRLYGSQAGLSWLAKPVTGQSSIGLASRHGSIINQSMPLMDPLVTLFGSIHEKLPETGAGGSMRSTLFPNFGSMFSTAEPHVKNEQWDEESLQREGEDYMSDAADGDSDDNLHSPLISRQTTSLEKDLPPPPSHGSILGSMRRHSSLMQGSGEQGGSTGIGGGWQLAWKWTDKDEDGKHQGGFKRIYLHEEGVSASHRGSIVSIPGEGEFVQAAALVSQPALYSKELIDGHPVGPAMVHPSETASKGPSWKALLEPGVKHALIVGVGIQILQQFSGINGVLYYTPQILEEAGVEVLLSDIGIGSESASFLISAFTTFLMLPCIGVAMKLMDVSGRRQLLLTTIPVLIVSLIILVIGSLVNFGNVAHAAISTVCVVVYFCCFVMGYGPIPNILCSEIFPTRVRGLCIAICALVFWIGDIIITYSLPVMLSSLGLGGVFAIYAVVCFISWIFVFLKVPETKGMPLEVISEFFSVGAKQAASAKNE*







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