|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G03600 | AT | Annotation by Michelle Graham. TAIR10: ribosomal protein S2 | chr3:867847-868506 REVERSE LENGTH=219 | SoyBase | E_val: 2.00E-84 | ISS |
GO:0006412 | GO-bp | Annotation by Michelle Graham. GO Biological Process: translation | SoyBase | N/A | ISS |
GO:0006626 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein targeting to mitochondrion | SoyBase | N/A | ISS |
GO:0019408 | GO-bp | Annotation by Michelle Graham. GO Biological Process: dolichol biosynthetic process | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0005763 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial small ribosomal subunit | SoyBase | N/A | ISS |
GO:0003735 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: structural constituent of ribosome | SoyBase | N/A | ISS |
KOG0832 | KOG | Mitochondrial/chloroplast ribosomal protein S2 | JGI | ISS | |
PTHR12534 | Panther | 30S RIBOSOMAL PROTEIN S2 (PROKARYOTIC AND ORGANELLAR) | JGI | ISS | |
PF00318 | PFAM | Ribosomal protein S2 | JGI | ISS | |
PF01704 | PFAM | UTP--glucose-1-phosphate uridylyltransferase | JGI | ISS | |
UniRef100_G7J8L5 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Medicago truncatula RepID=G7J8L5_MEDTR | SoyBase | E_val: 0 | ISS |
UniRef100_I1K6X0 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K6X0_SOYBN | SoyBase | E_val: 0 | ISS |
Glyma06g00433 not represented in the dataset |
Glyma06g00433 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g00433.1 sequence type=CDS gene model=Glyma06g00433 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGACGATCCATTCGGTGGTGATACAGAAGCTGCTTAGCACCAATGCTCAGGTGGGTCGACGTGTTGCCGCTCACCATTTGAAGGAGTTCACCTATGGCTTCCGCAACAAAATGGCCATCATCGACTCCGACAAGACCCTCATTTGCATGCGCAGTGCCTGCAACTTCATGGCCTCCCTCGCCCGCCACAACGGCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGAAATCTTCGACCTCATGACCAAGAAGGTGGGCTCCTACAGCCCCTCCACCAACTCTCTCTGGCGCACCGGCGGCTTCCTCACCAATAGCCTCAGCCCCAAGAAGTTCCGCTCTCGCAACAAGAAGCTCGTCTTCGGCCCCACCCAGCCTCCCGATTGCATCTTCATCGTCGACACCGAGCGTAAGTCTTCTGTCATCAACGAGGCTTTCAAGCTTCAAATTCCCGTCGTCGCCTTGGTCGACTCCGCCATGCCCCTCGACGTCTATAAGCGCATTGCCTATCCTGTTCCCGCCAATCATTCTGTCCAATTCGTTTATTTGTTCTGTAATTTGATTACCAAAACCTTGCTTCACGAGAAGGCCAAGTCTGATGCTGCCAATCCCGATATTGATGCTCAAATGGAAGAAGCTCCGCGCAAGGGCAAGGGCAAGACCTATTTGGATAAGGTCGACGTAACCGTAGTTCTCTACGATAATTTAGCTCCCTTACCTCAAGATATAGAAGAAACTAAGAAGCTTTTGGACAAGCTTGTTGTTTTGAAGTTTAATGGTTCTCAAGGAAGAAATATGTGTTTTGACGGTCCCAAATCTGCAATTGATATTTGTGATGGACTGACATATCTGGATTTGATCATTAACCAGATTGAGACCCTCAATTCCAAGTATGGAAGCAGGGTTCCATTGCTTCTTTTCAATAAAGATGACATTCATGATAGTTCTCTAAAGGTTTTGGAGAAGTATTCTAAATCAAGTGTTGAAGTGCACACTTTTAAACAGGGTGAAGATCGAGAGTTGAAATCATTGGGTGAATATTATAGCAAGGAGGAAGTGCATCCATTTGATGATGTTGATGTGTTCCGTTTACTAATGACTGGTGGAACCCTTGATTCATTATTATCACAGGGTAAGGAGTATATCCTAGTGTTGAAGTCGGACAATGTGGCAACAGTCCTTGATCCAAACATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTATGCAGAAATATTTTTATCTATCACATGAAGAGCTGCCACTTCTCTTTTTAA
>Glyma06g00433.1 sequence type=predicted peptide gene model=Glyma06g00433 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MTIHSVVIQKLLSTNAQVGRRVAAHHLKEFTYGFRNKMAIIDSDKTLICMRSACNFMASLARHNGRFMFINTNPLFDEIFDLMTKKVGSYSPSTNSLWRTGGFLTNSLSPKKFRSRNKKLVFGPTQPPDCIFIVDTERKSSVINEAFKLQIPVVALVDSAMPLDVYKRIAYPVPANHSVQFVYLFCNLITKTLLHEKAKSDAANPDIDAQMEEAPRKGKGKTYLDKVDVTVVLYDNLAPLPQDIEETKKLLDKLVVLKFNGSQGRNMCFDGPKSAIDICDGLTYLDLIINQIETLNSKYGSRVPLLLFNKDDIHDSSLKVLEKYSKSSVEVHTFKQGEDRELKSLGEYYSKEEVHPFDDVDVFRLLMTGGTLDSLLSQGKEYILVLKSDNVATVLDPNILNHLMINDIEYCMEVCRNIFIYHMKSCHFSF*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||