SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A newer version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G35300 | AT | Annotation by Michelle Graham. TAIR10: tonoplast monosaccharide transporter2 | chr4:16796432-16799071 REVERSE LENGTH=739 | SoyBase | E_val: 0 | ISS |
| GO:0006810 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transport | SoyBase | N/A | ISS |
| GO:0055085 | GO-bp | Annotation by Michelle Graham. GO Biological Process: transmembrane transport | SoyBase | N/A | ISS |
| GO:0005773 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuole | SoyBase | N/A | ISS |
| GO:0005774 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: vacuolar membrane | SoyBase | N/A | ISS |
| GO:0005794 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: Golgi apparatus | SoyBase | N/A | ISS |
| GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
| GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
| GO:0005215 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transporter activity | SoyBase | N/A | ISS |
| GO:0005337 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: nucleoside transmembrane transporter activity | SoyBase | N/A | ISS |
| GO:0005351 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: sugar:hydrogen symporter activity | SoyBase | N/A | ISS |
| GO:0015144 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: carbohydrate transmembrane transporter activity | SoyBase | N/A | ISS |
| GO:0022857 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: transmembrane transporter activity | SoyBase | N/A | ISS |
| KOG0569 | KOG | Permease of the major facilitator superfamily | JGI | ISS | |
| PTHR24063 | Panther | FAMILY NOT NAMED | JGI | ISS | |
| PTHR24063:SF85 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
| PF00083 | PFAM | Sugar (and other) transporter | JGI | ISS | |
| UniRef100_G7J9B1 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Monosaccharide-sensing protein n=1 Tax=Medicago truncatula RepID=G7J9B1_MEDTR | SoyBase | E_val: 0 | ISS |
| UniRef100_I1K6U5 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K6U5_SOYBN | SoyBase | E_val: 0 | ISS |
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Glyma06g00220 not represented in the dataset |
Glyma06g00220 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma.06g000200 | Wm82.a2.v1 | IGC | As supplied by JGI |
| Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma06g00220.2 sequence type=transcript gene model=Glyma06g00220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GCGAACCCAGAAACTGCCTATTACCTTTTCGTGATCGATCGTGGGAGAAAAGGAAAAACAAAAGAATTATTTAGTTTATTATTTTAATGAAAGTGACATTTAAGCTTCAAGTGTGTAGTCTGAATGATGATTGTTTGACGCATAACTGATTCCGATCGGGGAGGGGGATGACGTGCAGAGCAGTGAGAGAGCTAAAAGGGCAGGTGTCCACTAACGAGCCTCTGTTGCAAAAAAAACAGGGGGCTCAATTTCATTTCATTATCAGCTGCTTTTCGACCCGACGAATAGGATCGCTACTTGTGCTGTTTTCTATACGCCTTTCGTTATCTTAGTCTTAGTACTGCACTCCAGTATTATTTTTTTAAGAAAAAAAAATTAAAAATAGTAATAGTAAAGAAAGAAAGAAAGAGCTCCCCCGCCCCCCGCCCCATGTTGCAGTGAGTGACCCATGTCCTTTTCTGCATCTGAGTCTGAGATAATTGAAACACCCACCCTCCAAGCCAAGGTGATATAATTAGGCTGATTGATTACGAAACTAAGTGAAACTATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTACAAGGATGGGATAATGCGACTATTGCAGGATCTATCCTGTACATAAAAAAGGAATTTCAATTAGAAAATGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACTACATGCTCTGGGGCCCTATCAGACTTGCTAGGCCGACGTCCAATGTTGATTATCTCCTCTATGCTTTATTTTGTTAGTTCTCTCGTGATGCTGTGGTCTCCAAATGTTTATATCCTCCTCTTTGCTAGACTTTTAGATGGTTTGGGAATTGGTTTAGCAGTTACCTTGGTTCCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTTTGGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTGATGAAGGCGCCTAGCTGGAGAATCATGTTGGGTGTTCTTTCAATCCCTTCTCTTATTTTCTTTGCACTCACACTGTTGTTCTTGCCTGAGTCTCCCAGATGGCTTGTCAGTAAGGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGGCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTCTACTGGTTGAGGGTCTTGGAGTTGGGGGTGATACAGCCATAGAAGAGTATATAATTGGTCCAGCCAATGAACTTGATGAAGAGGATCAATCCAGAGAAAAAGATCAAATTAAGTTGTATGGACCGGAACAAGGTCAGTCCTGGGTTGCTAGACCTGTTGCTGGACAAAATTCTGTTGGCCTTGTATCTAGGAAAGGAAGCATGGTAAATCAGAGCGGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTATCCATGAGAAGCACCCGGAAACAGGAAGCATGCGAAGCACCCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAGCCAAGGAATGAAGATTGGGATGAGGAAAGCCTAGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCTCGTCAAACAACAAGTATGGATAAGGACATAACTCCTCCTGCCCATAGTAACCTTTCAAGCATGAGGCAAGGTAGTCTTTTACATGGAAATGCAGGAGAACCCACTGGTAGTACTGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGAGCCCAGATGGAAAGAAGGAAGGTGGATTCCAGAGAATATATTTACACCAAGATGGTGGTTCTGGATCTAGACGTGGGTCTGTGGTTTCACTCCCTGGTGGTGATTTACCAACTGATGGTGAGGTTGTACAGGCTGCTGCTCTGGTGAGTCGGTCAGCCCTTTATAACAAGGACCTTATGTGTCAACGGCCAGTTGGACCAGCTATGATTCATCCGTCTGAAACAATTGCAAAAGGGCCAAGTTGGAGTGACCTTTTTGAACCTGGAGTAAAGCATGCATTAATTGTGGGGGTGGGAATGCAAATTCTTCAGCAGTGCAGTTCTCTGGTATAAATGGGGTCCTCTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAGTCTAGGCCTTGGTTCTACTTCTTCGTCCTTTCTTATTAGTGCGGTGACAACCTTGTTGATGCTTCCTTGTATAGCCATTGCCATGAGGCTCATGGATATTTCGGGCAGAAGGACTTTGCTGCTCAGTACAATCCCCGTCCTAATAGTAGCTCTTCTCATATTAGTCCTGGGGAGTCTTGTGGATTTGGGAACCACTGCAAATGCATCAATCTCAACCATTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGCCTCTGCATTGCCATTTGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCAGTTATGCTCAATTCTTTAGGCCTCGCTGGTGTTTTTGGTATTTATGCTGTCGCGTGCTTCATAGCATGGGTGTTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTTGGAGCAAAACAGGTTGACGATGCCAAGCACAACTGACCTAAGGATATGATAAATTCAAAAGTTTTGACGGTACCTTCTAATTGTTTTCTATCTACGGCTGTTTAAAATTTTTCCCTCTTTTAAAATTTTCTTTTCTATTTATTCTCTCTTTTCCGTGGGTTGAGATTCAGAAACAAGAAACTTTGTTTCTATAAAGAAAAACTTTCATTTTCTGGTTCATTTATGAAACTTTATATACTTCCTAGTTACCCTGCTATTCGTAGTTGAAAG
>Glyma06g00220.1 sequence type=CDS gene model=Glyma06g00220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTACAAGGATGGGATAATGCGACTATTGCAGGATCTATCCTGTACATAAAAAAGGAATTTCAATTAGAAAATGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACTACATGCTCTGGGGCCCTATCAGACTTGCTAGGCCGACGTCCAATGTTGATTATCTCCTCTATGCTTTATTTTGTTAGTTCTCTCGTGATGCTGTGGTCTCCAAATGTTTATATCCTCCTCTTTGCTAGACTTTTAGATGGTTTGGGAATTGGTTTAGCAGTTACCTTGGTTCCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTTTGGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTGATGAAGGCGCCTAGCTGGAGAATCATGTTGGGTGTTCTTTCAATCCCTTCTCTTATTTTCTTTGCACTCACACTGTTGTTCTTGCCTGAGTCTCCCAGATGGCTTGTCAGTAAGGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGGCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTCTACTGGTTGAGGGTCTTGGAGTTGGGGGTGATACAGCCATAGAAGAGTATATAATTGGTCCAGCCAATGAACTTGATGAAGAGGATCAATCCAGAGAAAAAGATCAAATTAAGTTGTATGGACCGGAACAAGGTCAGTCCTGGGTTGCTAGACCTGTTGCTGGACAAAATTCTGTTGGCCTTGTATCTAGGAAAGGAAGCATGGTAAATCAGAGCGGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTATCCATGAGAAGCACCCGGAAACAGGAAGCATGCGAAGCACCCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAGCCAAGGAATGAAGATTGGGATGAGGAAAGCCTAGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCTCGTCAAACAACAAGTATGGATAAGGACATAACTCCTCCTGCCCATAGTAACCTTTCAAGCATGAGGCAAGGTAGTCTTTTACATGGAAATGCAGGAGAACCCACTGGTAGTACTGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGAGCCCAGATGGAAAGAAGGAAGGTGGATTCCAGAGAATATATTTACACCAAGATGGTGGTTCTGGATCTAGACGTGGGTCTGTGGTTTCACTCCCTGGTGGTGATTTACCAACTGATGGTGAGGTTGTACAGGCTGCTGCTCTGGTGAGTCGGTCAGCCCTTTATAACAAGGACCTTATGTGTCAACGGCCAGTTGGACCAGCTATGATTCATCCGTCTGAAACAATTGCAAAAGGGCCAAGTTGGAGTGACCTTTTTGAACCTGGAGTAAAGCATGCATTAATTGTGGGGGTGGGAATGCAAATTCTTCAGCAGTTCTCTGGTATAAATGGGGTCCTCTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAGTCTAGGCCTTGGTTCTACTTCTTCGTCCTTTCTTATTAGTGCGGTGACAACCTTGTTGATGCTTCCTTGTATAGCCATTGCCATGAGGCTCATGGATATTTCGGGCAGAAGGACTTTGCTGCTCAGTACAATCCCCGTCCTAATAGTAGCTCTTCTCATATTAGTCCTGGGGAGTCTTGTGGATTTGGGAACCACTGCAAATGCATCAATCTCAACCATTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCAATTCCTAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGCCTCTGCATTGCCATTTGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCAGTTATGCTCAATTCTTTAGGCCTCGCTGGTGTTTTTGGTATTTATGCTGTCGCGTGCTTCATAGCATGGGTGTTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTTGGAGCAAAACAGGTTGACGATGCCAAGCACAACTGA >Glyma06g00220.2 sequence type=CDS gene model=Glyma06g00220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGAGTGGAGCTGTTCTTGTTGCTGTTGCTGCTGCCATCGGTAACTTACTACAAGGATGGGATAATGCGACTATTGCAGGATCTATCCTGTACATAAAAAAGGAATTTCAATTAGAAAATGAACCCACAGTTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACTACATGCTCTGGGGCCCTATCAGACTTGCTAGGCCGACGTCCAATGTTGATTATCTCCTCTATGCTTTATTTTGTTAGTTCTCTCGTGATGCTGTGGTCTCCAAATGTTTATATCCTCCTCTTTGCTAGACTTTTAGATGGTTTGGGAATTGGTTTAGCAGTTACCTTGGTTCCTCTTTACATATCTGAGACAGCTCCTCCTGAGATTAGGGGATTACTCAATACACTTCCACAGTTCACTGGTTCTTTGGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTGATGAAGGCGCCTAGCTGGAGAATCATGTTGGGTGTTCTTTCAATCCCTTCTCTTATTTTCTTTGCACTCACACTGTTGTTCTTGCCTGAGTCTCCCAGATGGCTTGTCAGTAAGGGCCGAATGCTTGAGGCCAAGAAGGTTTTGCAGCGGCTTCGTGGAAGGGAAGATGTTTCCGGTGAAATGGCTCTACTGGTTGAGGGTCTTGGAGTTGGGGGTGATACAGCCATAGAAGAGTATATAATTGGTCCAGCCAATGAACTTGATGAAGAGGATCAATCCAGAGAAAAAGATCAAATTAAGTTGTATGGACCGGAACAAGGTCAGTCCTGGGTTGCTAGACCTGTTGCTGGACAAAATTCTGTTGGCCTTGTATCTAGGAAAGGAAGCATGGTAAATCAGAGCGGTCTAGTGGACCCTCTAGTGACCCTCTTTGGTAGTATCCATGAGAAGCACCCGGAAACAGGAAGCATGCGAAGCACCCTTTTTCCACACTTTGGGAGTATGTTTAGTGTTGGGGGAAATCAGCCAAGGAATGAAGATTGGGATGAGGAAAGCCTAGCCAGAGAGGGTGATGATTATGTCTCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCTCGTCAAACAACAAGTATGGATAAGGACATAACTCCTCCTGCCCATAGTAACCTTTCAAGCATGAGGCAAGGTAGTCTTTTACATGGAAATGCAGGAGAACCCACTGGTAGTACTGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGAGAGAGCCCAGATGGAAAGAAGGAAGGTGGATTCCAGAGAATATATTTACACCAAGATGGTGGTTCTGGATCTAGACGTGGGTCTGTGGTTTCACTCCCTGGTGGTGATTTACCAACTGATGGTGAGGTTGTACAGGCTGCTGCTCTGGTGAGTCGGTCAGCCCTTTATAACAAGGACCTTATGTGTCAACGGCCAGTTGGACCAGCTATGATTCATCCGTCTGAAACAATTGCAAAAGGGCCAAGTTGGAGTGACCTTTTTGAACCTGGAGTAAAGCATGCATTAATTGTGGGGGTGGGAATGCAAATTCTTCAGCAGTGCAGTTCTCTGGTATAA
>Glyma06g00220.1 sequence type=predicted peptide gene model=Glyma06g00220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKKEFQLENEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSMLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSLGMFFSYCMVFGMSLMKAPSWRIMLGVLSIPSLIFFALTLLFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIIGPANELDEEDQSREKDQIKLYGPEQGQSWVARPVAGQNSVGLVSRKGSMVNQSGLVDPLVTLFGSIHEKHPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLQSPLISRQTTSMDKDITPPAHSNLSSMRQGSLLHGNAGEPTGSTGIGGGWQLAWKWSERESPDGKKEGGFQRIYLHQDGGSGSRRGSVVSLPGGDLPTDGEVVQAAALVSRSALYNKDLMCQRPVGPAMIHPSETIAKGPSWSDLFEPGVKHALIVGVGMQILQQFSGINGVLYYTPQILEQAGVGYLLSSLGLGSTSSSFLISAVTTLLMLPCIAIAMRLMDISGRRTLLLSTIPVLIVALLILVLGSLVDLGTTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSLGLAGVFGIYAVACFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVDDAKHN* >Glyma06g00220.2 sequence type=predicted peptide gene model=Glyma06g00220 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKKEFQLENEPTVEGLIVAMSLIGATVVTTCSGALSDLLGRRPMLIISSMLYFVSSLVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSLGMFFSYCMVFGMSLMKAPSWRIMLGVLSIPSLIFFALTLLFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIIGPANELDEEDQSREKDQIKLYGPEQGQSWVARPVAGQNSVGLVSRKGSMVNQSGLVDPLVTLFGSIHEKHPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLQSPLISRQTTSMDKDITPPAHSNLSSMRQGSLLHGNAGEPTGSTGIGGGWQLAWKWSERESPDGKKEGGFQRIYLHQDGGSGSRRGSVVSLPGGDLPTDGEVVQAAALVSRSALYNKDLMCQRPVGPAMIHPSETIAKGPSWSDLFEPGVKHALIVGVGMQILQQCSSLV*
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