Report for Sequence Feature Glyma05g37910
Feature Type: gene_model
Chromosome: Gm05
Start: 41398421
stop: 41403228
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g37910
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G41210 AT
Annotation by Michelle Graham. TAIR10: glutathione S-transferase THETA 1 | chr5:16492550-16493884 REVERSE LENGTH=245
SoyBase E_val: 5.00E-118 ISS
GO:0009407 GO-bp
Annotation by Michelle Graham. GO Biological Process: toxin catabolic process
SoyBase N/A ISS
GO:0010583 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005777 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: peroxisome
SoyBase N/A ISS
GO:0004364 GO-mf
Annotation by Michelle Graham. GO Molecular Function: glutathione transferase activity
SoyBase N/A ISS
KOG0867
KOG
Glutathione S-transferase
JGI ISS
PTHR11260 Panther
GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING
JGI ISS
PTHR11260:SF8 Panther
GLUTATHIONE S-TRANSFERASE
JGI ISS
PF02798 PFAM
Glutathione S-transferase, N-terminal domain
JGI ISS
UniRef100_G7LI06 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Glutathione S-transferase theta n=1 Tax=Medicago truncatula RepID=G7LI06_MEDTR
SoyBase E_val: 4.00E-163 ISS
UniRef100_I1K6J9 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K6J9_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g37910
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma05g37910
Paralog Evidence Comments
Glyma08g01691 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g37910 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g206900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g37910
Coding sequences of Glyma05g37910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g37910.1 sequence type=CDS gene model=Glyma05g37910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGATGGGAAAGCTAAAGGTGTATGCGGATCGAATGTCCCAGCCTTCTCGAGCAGTTCTCATATTCTGCAGGTTTAACGGAATTGACTTTGAGGAGATTAAAGTAGACATTTCCAAACGCCACCACCTTTCTCCTGAATTTAGAGAAGTAAACCCTCTGCAGAAAGTTCCGGCTATAGTTCATGGAAGCTTCAATCTCTCCGAGAGCCACGCAATCCTTGTCTATCTTGCTTCTGCTTTCCCTGGAATTGCTGACCATTGGTATCCAAGTGATCTTTACAGGAGAGCCAAAATTATCTCAGTGATGGATTGGCATCACTCTAATTTACGACATGGAGCAGTGAACTATGTAATAAATACTGTACTAGGACCTGCAACTGGCCGTCCACTTAATCCAAAAGCAGCTGCTGAAGCAGAGAAAGTTCTATTATCTTCTTTATCGAAACTAGAGGATATTTGGCTCAATGGAGATGGACACTTCCTGCTTGGTGTCTCTCAACCATCTATAGCAGATCTCAGCATGGTTTGTGAACTCATGCAACTTGAGGTTTTGGACGAGAAGGATCGCAGTCGAATATTATCCCCATACAAGAAAGTTCTTCAGTGGATTGAGGATACGAGAACTGCAACAAATCCTCACTTTGAAGAAGTGCATAATATCCTTTATAGAGCTAAAAAGAAATTTGAACAGCAGCGTTCAAGGGTAGCTGAAACTGGGACTGAGCCTAGTAACAAGATGGGGGGTCATTCAAAGATGTGA
Predicted protein sequences of Glyma05g37910
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g37910.1 sequence type=predicted peptide gene model=Glyma05g37910 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MMGKLKVYADRMSQPSRAVLIFCRFNGIDFEEIKVDISKRHHLSPEFREVNPLQKVPAIVHGSFNLSESHAILVYLASAFPGIADHWYPSDLYRRAKIISVMDWHHSNLRHGAVNYVINTVLGPATGRPLNPKAAAEAEKVLLSSLSKLEDIWLNGDGHFLLGVSQPSIADLSMVCELMQLEVLDEKDRSRILSPYKKVLQWIEDTRTATNPHFEEVHNILYRAKKKFEQQRSRVAETGTEPSNKMGGHSKM*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
