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Report for Sequence Feature Glyma05g36740

Feature Type:gene_model
Chromosome:Gm05
Start:40526279
stop:40528204
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma05g36740
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G59725AT Annotation by Michelle Graham. TAIR10: DNAJ heat shock family protein | chr1:21950738-21952210 FORWARD LENGTH=331 SoyBaseE_val: 3.00E-58ISS
GO:0006457GO-bp Annotation by Michelle Graham. GO Biological Process: protein folding SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0031072GO-mf Annotation by Michelle Graham. GO Molecular Function: heat shock protein binding SoyBaseN/AISS
GO:0051082GO-mf Annotation by Michelle Graham. GO Molecular Function: unfolded protein binding SoyBaseN/AISS
PTHR24077Panther FAMILY NOT NAMED JGI ISS
PTHR24077:SF89Panther JGI ISS
PF01556PFAM DnaJ C terminal region JGI ISS
UniRef100_B9S2E0UniRef Annotation by Michelle Graham. Most informative UniRef hit: Curved DNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S2E0_RICCO SoyBaseE_val: 1.00E-60ISS
UniRef100_I1K683UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K683_SOYBN SoyBaseE_val: 3.00E-118ISS

Expression Patterns of Glyma05g36740
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g36740 not represented in the dataset
Glyma05g36740 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma05g36740 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.05g218200 Wm82.a2.v1IGC As supplied by JGI

References for Glyma05g36740
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma05g36740
>Glyma05g36740.2   sequence type=CDS   gene model=Glyma05g36740   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACTTTTACGGTGATAATTATCTCCTTGACTCTAATACGAAGGATGCAGTGGTGGATCAATGCAGCTTTCTTTGTTCCCTTGAAGAGCTTTACAACGGTTGCAAAGAGAAGTATAAGGTCTCAAGGACGTACTGTTTCTGATAAATTCGGAGTATTAAAGTCTGTTGAAGAAATTTTGAAGATAGACATAAAACCTGGTTGGGAAAATGGCACAAAAATCACTTTTCCTGGAAAAGGCAACAAAGAACAAGGTGCTCCAGCTGATCTAGTTTTTGTGTTGGGTGAGAGGCCTCATGCTATTTTCAAGAGGGATAGAAATGATCTTGTAGTGATCCAGAAGATATTACTTGCAGATGCTCTCACGGGAACGAGTCTTAACTTGACTACCTCGGATGGAAGAGATCTCACAATCCAAGTGACAGATATTGTAAAATCAGGCTATGAGCTGGTGGTCCCAAATGAAGGCATGCCCATCTCAAAGAAACCTGGCAAGAAAGAGAATCTTAGAATCAAGTTTGATGTTATCTGTCCATCAAGGCTGACCACACAACAGAAGTGTGATCTAAGAAGGATTCAGAGTGATGCTGATTACTAA
Predicted protein sequences of Glyma05g36740
>Glyma05g36740.2   sequence type=predicted peptide   gene model=Glyma05g36740   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTFTVIIISLTLIRRMQWWINAAFFVPLKSFTTVAKRSIRSQGRTVSDKFGVLKSVEEILKIDIKPGWENGTKITFPGKGNKEQGAPADLVFVLGERPHAIFKRDRNDLVVIQKILLADALTGTSLNLTTSDGRDLTIQVTDIVKSGYELVVPNEGMPISKKPGKKENLRIKFDVICPSRLTTQQKCDLRRIQSDADY*






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