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Report for Sequence Feature Glyma05g33691

Feature Type:gene_model
Chromosome:Gm05
Start:38271114
stop:38272507
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma05g33691
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G18300AT Annotation by Michelle Graham. TAIR10: nudix hydrolase homolog 4 | chr1:6299841-6300799 FORWARD LENGTH=207 SoyBaseE_val: 2.00E-18ISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0016787GO-mf Annotation by Michelle Graham. GO Molecular Function: hydrolase activity SoyBaseN/AISS
PTHR12629Panther DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE JGI ISS
PF00293PFAM NUDIX domain JGI ISS
UniRef100_G7KQ95UniRef Annotation by Michelle Graham. Most informative UniRef hit: Nudix hydrolase n=1 Tax=Medicago truncatula RepID=G7KQ95_MEDTR SoyBaseE_val: 6.00E-24ISS
UniRef100_UPI000233A855UniRef Annotation by Michelle Graham. Best UniRef hit: UPI000233A855 related cluster n=1 Tax=unknown RepID=UPI000233A855 SoyBaseE_val: 2.00E-32ISS

Expression Patterns of Glyma05g33691
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g33691 not represented in the dataset
Glyma05g33691 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma05g33691 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.05g247400 Wm82.a2.v1IGC As supplied by JGI

References for Glyma05g33691
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma05g33691
>Glyma05g33691.1   sequence type=CDS   gene model=Glyma05g33691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAATTTTATTTCAGGCATGTCGATGCGAGGGCATACAAAATTTACATAAATTCAATTCATAAATTAAGCAACCTCTGGGGATTTGTTTCCCGAGCAACTCGACAACATGATGTGTCTCGTTGCCCGCACTGGCAGCGCTACGACGATGGTTGTCGCCAAGTTGTGGGATACCAAAATAAGGAATTAGAGGTTTTGGTAATTAGTGCTCAGAAAGGCAATGGAATGCAGTTCCCAAAGGGAGGTTGGGAGAGCGACGAATCCATGGAGCAGGCTGCTTTAAGGGAGACCATAGAGGAAGCTGGGGATTAA
Predicted protein sequences of Glyma05g33691
>Glyma05g33691.1   sequence type=predicted peptide   gene model=Glyma05g33691   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEFYFRHVDARAYKIYINSIHKLSNLWGFVSRATRQHDVSRCPHWQRYDDGCRQVVGYQNKELEVLVISAQKGNGMQFPKGGWESDESMEQAALRETIEEAGD*






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