Glyma05g33630 - SoyBase

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Report for Sequence Feature Glyma05g33630

Feature Type:	gene_model
Chromosome:	Gm05
Start:	38237658
stop:	38240589
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma05g33630

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G17790	AT	Annotation by Michelle Graham. TAIR10: purple acid phosphatase 17 \| chr3:6089779-6090988 FORWARD LENGTH=338	SoyBase	E_val: 2.00E-165	ISS
GO:0016036	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular response to phosphate starvation	SoyBase	N/A	ISS
GO:0019375	GO-bp	Annotation by Michelle Graham. GO Biological Process: galactolipid biosynthetic process	SoyBase	N/A	ISS
GO:0030643	GO-bp	Annotation by Michelle Graham. GO Biological Process: cellular phosphate ion homeostasis	SoyBase	N/A	ISS
GO:0042542	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to hydrogen peroxide	SoyBase	N/A	ISS
GO:0045892	GO-bp	Annotation by Michelle Graham. GO Biological Process: negative regulation of transcription, DNA-dependent	SoyBase	N/A	ISS
GO:0005576	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: extracellular region	SoyBase	N/A	ISS
GO:0009986	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cell surface	SoyBase	N/A	ISS
GO:0003993	GO-mf	Annotation by Michelle Graham. GO Molecular Function: acid phosphatase activity	SoyBase	N/A	ISS
GO:0004722	GO-mf	Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine phosphatase activity	SoyBase	N/A	ISS
GO:0016787	GO-mf	Annotation by Michelle Graham. GO Molecular Function: hydrolase activity	SoyBase	N/A	ISS
GO:0016791	GO-mf	Annotation by Michelle Graham. GO Molecular Function: phosphatase activity	SoyBase	N/A	ISS
KOG2679	KOG	Purple (tartrate-resistant) acid phosphatase	JGI		ISS
PTHR10161	Panther	ACID PHOSPHATASE-RELATED	JGI		ISS
PF00149	PFAM	Calcineurin-like phosphoesterase	JGI		ISS
UniRef100_E2D740	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Purple acid phosphatase n=1 Tax=Phaseolus vulgaris RepID=E2D740_PHAVU	SoyBase	E_val: 0	ISS
UniRef100_I1K593	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K593_SOYBN	SoyBase	E_val: 0	ISS

Proteins Associated with Glyma05g33630

Locus	Gene Symbol	Protein Name
	PAP9	Purple acid phosphatase 9 gene
	PAP9	Purple acid phosphatase gene 9

Expression Patterns of Glyma05g33630

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g33630 not represented in the dataset	Glyma05g33630 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Paralogs of Glyma05g33630

Paralog	Evidence	Comments
Glyma08g06090	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Gene model name correspondences to Glyma05g33630 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.05g247900	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma05g33630

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma05g33630

Limit To All Plant Sequences

>Glyma05g33630.2   sequence type=transcript   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTGATCATGACTCCCAAGAGCGGAGAGGGAGAAAGGTGCAAAAGACAAATTTTCTTCACTTGTTTAATTTGAATGGTTTATAGGCTAATCCACCAATCAAATTCAATCATCAATGGAGTTGCGTTGCGTTGCGTCGAGAGCTATAATATTCTATACTGGAAGCAGAGCATCCGATCCGAATATTCTCCTAGATATGCCTTCCTCTTTAAAACTGGTTTCGAATATTCTACCCTTTCCTGCTCATTGCATGGCATGTTCGCATATATCACCAACCCAACTTGTGCCTCCCCCTAACGCAACCCATGTCAGTTTCCCAATTCAATTGCCAACACTTGCCCATCACCGTTTTTCTGTCACAACCTAATACCCCAGCCAGAACCATGCACTGCATTTTCTGATTTAAATAACCAGAAGAAGAGTTTAAGGACATATTTTGTATTATTAAGTTCCAATATTATATTACTTTTCCTTACTAATCTAATAATTGTTTTTTTCATAGTAACATTAGTTTTCAACAACTTGGTATTATATTATATTATTCAACAACCTAGGATCCATATTCATTTGAGAGATTTAAAGTTCAACAAGTAGGGGTTAGATAACACCCCACAAGTCTTTTTCTTATTGGCATGAGCCTGTCTCTCTATCCTGTGTAATCTGACGCTGTGGGTCCAATTGTCCAAATATTACTGATCTAATAATTGTTTTTTCCAGAGTGACATTAGTTTTCAACATGAAGCTTTTTTTTAAAAGTGAGAAGCTTTCGCTTGTTTTGGTGTTCCAGTTCCACTTAGAGCCATGACAGACATCTCCAAGTCCCTTCTCTTTACCTTTACCATCATCATCAGCTTTGGCTTGTGCATTCTTTATGCATCTGCAGAACTCCAGAGATTTGCACACTCTTCCAAACATGATGGTGCTCTTAGCTTCTTGGTGCTTGGTGACTGGGGAAGAAGAGGTGCTTACAACCAATCACTAGTTGCTTTCCAGATGGGAAAGGTTGGAGAGAAGCTTGATATCGACTTTGTAGTTTCCACTGGAGACAACTTCTATGACAATGGACTGACTAGTGACCATGACAACGCGTTTCAAGAATCATTCACTAAAATTTACACAGCAAAAAGCTTGCAAAATCAGTGGTACAGCGTGTTAGGCAACCACGACTATAGGGGTGATGCAGAGGCCCAATTGAGCCCGGTCCTTAGAGAAATTGATAGCAGATGGCTTTGCTTAAGGTCCTTTATTGTAGATTCAGAGCTGGTTGAGATTTTCTTTGTAGACACCACTCCTTTTGTTGACGAGTACTTCACTGAACCACCGGAACACAAGTATGATTGGCGGGGCATTGGCCCACAAAAATCTTATATTTCTAACTTACTCAAGGACCTAGAATTGGCACTGAGGGGATCAACAGCAAAATGGAGGATTGTTGTTGGTCACCATGCCATTAGAAGTGTTGGGCATCATGGTGATACTCAAGAACTCATAAATCGGCTTCTCCCTATCCTTCAGGTAACTAAAGGTTGAGGATGAAGAACGGGAGATGATCATGGCCTCTCTTTCCTAGTTCCTCTACCTAACTCTTCTGATTTTATTTTACTTTCAAATTTTAGGCAAATAACGTTCACTTTTACATGAACGGGCATGATCATTGTCTTGAGCACATTAGTGACACGGAGAGGTAAAATTAAATGAATTCATGCAAATTTTTACATGCAACGAAGCCAAAATAATATACTTATCTGACGGAGGAACTTGTTTGCAGCCCCATTCAGTTCCTGACTAGCGGGGCAGGGTCAAAGGCTTGGAGAGGAGACATTGAAGGAATGAACCGAAGAGGCGTAAATTTCTTCTATGATGGACAAGGCTTCATGTCAGTGAAATTGACTCAGACGGATGCCACCATTGAGTTCTATGATGTTTTTGGCAACGTTTTGCACAGATTGACTTCTTCAAAACAGCTACATTCTTCCATGTAAAGTTTAGAGCTAGATACTAGACATTGAGATTAAATAGACCAATCCAAATTGGTTGATGAAATTTCAAACTAATCCTTGATGTCATGCTTGAGTATGTACGAGAAATGAAAATATGAATGAAGGATTCTTCACTGTGATTCATTCACCGCAGTGATGAATTGCTGTTTAACTTCTGTCTTCTAAATTTAAGATGCAAGAGCAGTAATTGTACTTATTTTCACTCCGCCTGCCTTAGTTTGGAAAACATTGTGTTTTAAAAGGTTTTGATTTCAACATCACCGAATCAATAATTTAATATTTGA

>Glyma05g33630.3   sequence type=transcript   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
TTGATCATGACTCCCAAGAGCGGAGAGGGAGAAAGGTGCAAAAGACAAATTTTCTTCACTTGTTTAATTTGAATGGTTTATAGGCTAATCCACCAATCAAATTCAATCATCAATGGAGTTGCGTTGCGTTGCGTCGAGAGCTATAATATTCTATACTGGAAGCAGAGCATCCGATCCGAATATTCTCCTAGATATGCCTTCCTCTTTAAAACTGGTTTCGAATATTCTACCCTTTCCTGCTCATTGCATGGCATGTTCGCATATATCACCAACCCAACTTGTGCCTCCCCCTAACGCAACCCATGTCAGTTTCCCAATTCAATTGCCAACACTTGCCCATCACCGTTTTTCTGTCACAACCTAATACCCCAGCCAGAACCATGCACTGCATTTTCTGATTTAAATAACCAGAAGAAGAGTTTAAGGACATATTTTGTATTATTAAGTTCCAATATTATATTACTTTTCCTTACTAATCTAATAATTGTTTTTTTCATAGTAACATTAGTTTTCAACAACTTGGTATTATATTATATTATTCAACAACCTAGGATCCATATTCATTTGAGAGATTTAAAGTTCAACAAGTAGGGGTTAGATAACACCCCACAAGTCTTTTTCTTATTGGCATGAGCCTGTCTCTCTATCCTGTGTAATCTGACGCTGTGGGTCCAATTGTCCAAATATTACTGATCTAATAATTGTTTTTTCCAGAGTGACATTAGTTTTCAACATGAAGCTTTTTTTTAAAAGTGAGAAGCTTTCGCTTGTTTTGGTGTTCCAGTTCCACTTAGAGCCATGACAGACATCTCCAAGTCCCTTCTCTTTACCTTTACCATCATCATCAGCTTTGGCTTGTGCATTCTTTATGCATCTGCAGAACTCCAGAGATTTGCACACTCTTCCAAACATGATGGTGCTCTTAGCTTCTTGGTGCTTGGTGACTGGGGAAGAAGAGGTGCTTACAACCAATCACTAGTTGCTTTCCAGATGGGAAAGGTTGGAGAGAAGCTTGATATCGACTTTGTAGTTTCCACTGGAGACAACTTCTATGACAATGGACTGACTAGTGACCATGACAACGCGTTTCAAGAATCATTCACTAAAATTTACACAGCAAAAAGCTTGCAAAATCAGTGGTACAGCGTGTTAGGCAACCACGACTATAGGGGTGATGCAGAGGCCCAATTGAGCCCGGTCCTTAGAGAAATTGATAGCAGATGGCTTTGCTTAAGGTCCTTTATTGTAGATTCAGAGCTGGTTGAGATTTTCTTTGTAGACACCACTCCTTTTGTTGACGAGTACTTCACTGAACCACCGGAACACAAGTATGATTGGCGGGGCATTGGCCCACAAAAATCTTATATTTCTAACTTACTCAAGGTATGCGTAGATTATCTGAATTTGCAGATGACAGCGCTATGCTGTAAAATTCAAGTTGGGAGAGTTTTAATTATTCAGTTATCTGAAATTTTTTAAATAAATATTCCTAGTTCAATCTATAATTGCTTTTGATAGCAGAATAACCATAATTTTATTGATAAAACTAACCATTTGAACAAATTGAAATATATGAAACTGGCAAATTACCTTTGTTGGGTCCTGTTTGATGATTGATTAAAAATAGTTCTTTCATGTTACAAAAGTGAATAGGGTTATAACATTATGAATTATTATGTTTCAGGACCTAGAATTGGCACTGAGGGGATCAACAGCAAAATGGAGGATTGTTGTTGGTCACCATGCCATTAGAAGTGTTGGGCATCATGGTGATACTCAAGAACTCATAAATCGGCTTCTCCCTATCCTTCAGGCAAATAACGTTCACTTTTACATGAACGGGCATGATCATTGTCTTGAGCACATTAGTGACACGGAGAGCCCCATTCAGTTCCTGACTAGCGGGGCAGGGTCAAAGGCTTGGAGAGGAGACATTGAAGGAATGAACCGAAGAGGCGTAAATTTCTTCTATGATGGACAAGGCTTCATGTCAGTGAAATTGACTCAGACGGATGCCACCATTGAGTTCTATGATGTTTTTGGCAACGTTTTGCACAGATTGACTTCTTCAAAACAGCTACATTCTTCCATGTAAAGTTTAGAGCTAGATACTAGACATTGAGATTAAATAGACCAATCCAAATTGGTTGATGAAATTTCAAACTAATCCTTGATGTCATGCTTGAGTATGTACGAGAAATGAAAATATGAATGAAGGATTCTTCACTGTGATTCATTCACCGCAGTGATGAATTGCTGTTTAACTTCTGTCTTCTAAATTTAAGATGCAAGAGCAGTAATTGTACTTATTTTCACTCCGCCTGCCTTAGTTTGGAAAACATTGTGTTTTAAAAGGTTTTGATTTCAACATCACCGAATCAATAATTTAATATTTGA

Coding sequences of Glyma05g33630

Limit To All Plant Sequences

>Glyma05g33630.1   sequence type=CDS   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACAGACATCTCCAAGTCCCTTCTCTTTACCTTTACCATCATCATCAGCTTTGGCTTGTGCATTCTTTATGCATCTGCAGAACTCCAGAGATTTGCACACTCTTCCAAACATGATGGTGCTCTTAGCTTCTTGGTGCTTGGTGACTGGGGAAGAAGAGGTGCTTACAACCAATCACTAGTTGCTTTCCAGATGGGAAAGGTTGGAGAGAAGCTTGATATCGACTTTGTAGTTTCCACTGGAGACAACTTCTATGACAATGGACTGACTAGTGACCATGACAACGCGTTTCAAGAATCATTCACTAAAATTTACACAGCAAAAAGCTTGCAAAATCAGTGGTACAGCGTGTTAGGCAACCACGACTATAGGGGTGATGCAGAGGCCCAATTGAGCCCGGTCCTTAGAGAAATTGATAGCAGATGGCTTTGCTTAAGGTCCTTTATTGTAGATTCAGAGCTGGTTGAGATTTTCTTTGTAGACACCACTCCTTTTGTTGACGAGTACTTCACTGAACCACCGGAACACAAGTATGATTGGCGGGGCATTGGCCCACAAAAATCTTATATTTCTAACTTACTCAAGGACCTAGAATTGGCACTGAGGGGATCAACAGCAAAATGGAGGATTGTTGTTGGTCACCATGCCATTAGAAGTGTTGGGCATCATGGTGATACTCAAGAACTCATAAATCGGCTTCTCCCTATCCTTCAGGCAAATAACGTTCACTTTTACATGAACGGGCATGATCATTGTCTTGAGCACATTAGTGACACGGAGAGCCCCATTCAGTTCCTGACTAGCGGGGCAGGGTCAAAGGCTTGGAGAGGAGACATTGAAGGAATGAACCGAAGAGGCGTAAATTTCTTCTATGATGGACAAGGCTTCATGTCAGTGAAATTGACTCAGACGGATGCCACCATTGAGTTCTATGATGTTTTTGGCAACGTTTTGCACAGATTGACTTCTTCAAAACAGCTACATTCTTCCATGTAA

>Glyma05g33630.2   sequence type=CDS   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACAGACATCTCCAAGTCCCTTCTCTTTACCTTTACCATCATCATCAGCTTTGGCTTGTGCATTCTTTATGCATCTGCAGAACTCCAGAGATTTGCACACTCTTCCAAACATGATGGTGCTCTTAGCTTCTTGGTGCTTGGTGACTGGGGAAGAAGAGGTGCTTACAACCAATCACTAGTTGCTTTCCAGATGGGAAAGGTTGGAGAGAAGCTTGATATCGACTTTGTAGTTTCCACTGGAGACAACTTCTATGACAATGGACTGACTAGTGACCATGACAACGCGTTTCAAGAATCATTCACTAAAATTTACACAGCAAAAAGCTTGCAAAATCAGTGGTACAGCGTGTTAGGCAACCACGACTATAGGGGTGATGCAGAGGCCCAATTGAGCCCGGTCCTTAGAGAAATTGATAGCAGATGGCTTTGCTTAAGGTCCTTTATTGTAGATTCAGAGCTGGTTGAGATTTTCTTTGTAGACACCACTCCTTTTGTTGACGAGTACTTCACTGAACCACCGGAACACAAGTATGATTGGCGGGGCATTGGCCCACAAAAATCTTATATTTCTAACTTACTCAAGGACCTAGAATTGGCACTGAGGGGATCAACAGCAAAATGGAGGATTGTTGTTGGTCACCATGCCATTAGAAGTGTTGGGCATCATGGTGATACTCAAGAACTCATAAATCGGCTTCTCCCTATCCTTCAGGTAACTAAAGGTTGA

>Glyma05g33630.3   sequence type=CDS   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGACAGACATCTCCAAGTCCCTTCTCTTTACCTTTACCATCATCATCAGCTTTGGCTTGTGCATTCTTTATGCATCTGCAGAACTCCAGAGATTTGCACACTCTTCCAAACATGATGGTGCTCTTAGCTTCTTGGTGCTTGGTGACTGGGGAAGAAGAGGTGCTTACAACCAATCACTAGTTGCTTTCCAGATGGGAAAGGTTGGAGAGAAGCTTGATATCGACTTTGTAGTTTCCACTGGAGACAACTTCTATGACAATGGACTGACTAGTGACCATGACAACGCGTTTCAAGAATCATTCACTAAAATTTACACAGCAAAAAGCTTGCAAAATCAGTGGTACAGCGTGTTAGGCAACCACGACTATAGGGGTGATGCAGAGGCCCAATTGAGCCCGGTCCTTAGAGAAATTGATAGCAGATGGCTTTGCTTAAGGTCCTTTATTGTAGATTCAGAGCTGGTTGAGATTTTCTTTGTAGACACCACTCCTTTTGTTGACGAGTACTTCACTGAACCACCGGAACACAAGTATGATTGGCGGGGCATTGGCCCACAAAAATCTTATATTTCTAACTTACTCAAGGTATGCGTAGATTATCTGAATTTGCAGATGACAGCGCTATGCTGTAAAATTCAAGTTGGGAGAGTTTTAATTATTCAGTTATCTGAAATTTTTTAA

Predicted protein sequences of Glyma05g33630

Limit To All Plant Sequences

>Glyma05g33630.1   sequence type=predicted peptide   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTDISKSLLFTFTIIISFGLCILYASAELQRFAHSSKHDGALSFLVLGDWGRRGAYNQSLVAFQMGKVGEKLDIDFVVSTGDNFYDNGLTSDHDNAFQESFTKIYTAKSLQNQWYSVLGNHDYRGDAEAQLSPVLREIDSRWLCLRSFIVDSELVEIFFVDTTPFVDEYFTEPPEHKYDWRGIGPQKSYISNLLKDLELALRGSTAKWRIVVGHHAIRSVGHHGDTQELINRLLPILQANNVHFYMNGHDHCLEHISDTESPIQFLTSGAGSKAWRGDIEGMNRRGVNFFYDGQGFMSVKLTQTDATIEFYDVFGNVLHRLTSSKQLHSSM*

>Glyma05g33630.2   sequence type=predicted peptide   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTDISKSLLFTFTIIISFGLCILYASAELQRFAHSSKHDGALSFLVLGDWGRRGAYNQSLVAFQMGKVGEKLDIDFVVSTGDNFYDNGLTSDHDNAFQESFTKIYTAKSLQNQWYSVLGNHDYRGDAEAQLSPVLREIDSRWLCLRSFIVDSELVEIFFVDTTPFVDEYFTEPPEHKYDWRGIGPQKSYISNLLKDLELALRGSTAKWRIVVGHHAIRSVGHHGDTQELINRLLPILQVTKG*

>Glyma05g33630.3   sequence type=predicted peptide   gene model=Glyma05g33630   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MTDISKSLLFTFTIIISFGLCILYASAELQRFAHSSKHDGALSFLVLGDWGRRGAYNQSLVAFQMGKVGEKLDIDFVVSTGDNFYDNGLTSDHDNAFQESFTKIYTAKSLQNQWYSVLGNHDYRGDAEAQLSPVLREIDSRWLCLRSFIVDSELVEIFFVDTTPFVDEYFTEPPEHKYDWRGIGPQKSYISNLLKVCVDYLNLQMTALCCKIQVGRVLIIQLSEIF*

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