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Feature Type: gene_model Chromosome: Gm05 Start: 37203123 stop: 37207375 Source: JGI Version: Wm82.a1.v1.1 High confidence: yes

A newer version of this gene model can be found here:

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G09920	AT	Annotation by Michelle Graham. TAIR10: RNA polymerase II, Rpb4, core protein | chr5:3096276-3097370 FORWARD LENGTH=138	SoyBase	E_val: 4.00E-90	ISS
GO:0000394	GO-bp	Annotation by Michelle Graham. GO Biological Process: RNA splicing, via endonucleolytic cleavage and ligation	SoyBase	N/A	ISS
GO:0006366	GO-bp	Annotation by Michelle Graham. GO Biological Process: transcription from RNA polymerase II promoter	SoyBase	N/A	ISS
GO:0008152	GO-bp	Annotation by Michelle Graham. GO Biological Process: metabolic process	SoyBase	N/A	ISS
GO:0032774	GO-bp	Annotation by Michelle Graham. GO Biological Process: RNA biosynthetic process	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005665	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: DNA-directed RNA polymerase II, core complex	SoyBase	N/A	ISS
GO:0000166	GO-mf	Annotation by Michelle Graham. GO Molecular Function: nucleotide binding	SoyBase	N/A	ISS
GO:0003824	GO-mf	Annotation by Michelle Graham. GO Molecular Function: catalytic activity	SoyBase	N/A	ISS
GO:0003899	GO-mf	Annotation by Michelle Graham. GO Molecular Function: DNA-directed RNA polymerase activity	SoyBase	N/A	ISS
KOG2351	KOG	RNA polymerase II, fourth largest subunit	JGI		ISS
PTHR21297	Panther	DNA-DIRECTED RNA POLYMERASE II	JGI		ISS
PF03874	PFAM	RNA polymerase Rpb4	JGI		ISS
UniRef100_G7LF25	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: DNA-directed RNA polymerase II subunit RPB4 n=2 Tax=Medicago truncatula RepID=G7LF25_MEDTR	SoyBase	E_val: 4.00E-92	ISS
UniRef100_I1K4W5	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K4W5_SOYBN	SoyBase	E_val: 5.00E-95	ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Paralog	Evidence	Comments
Glyma08g15515	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.05g189100	Wm82.a2.v1	IGC	As supplied by JGI

Schmutz et al. 2010   Genome sequence of the palaeopolyploid soybean   Nature 2010, 463:178-183