Report for Sequence Feature Glyma05g30050
Feature Type: gene_model
Chromosome: Gm05
Start: 35464852
stop: 35468382
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g30050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G36110 AT
Annotation by Michelle Graham. TAIR10: cytochrome P450, family 716, subfamily A, polypeptide 1 | chr5:14195377-14197613 FORWARD LENGTH=477
SoyBase E_val: 1.00E-144 ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0005506 GO-mf
Annotation by Michelle Graham. GO Molecular Function: iron ion binding
SoyBase N/A ISS
GO:0009055 GO-mf
Annotation by Michelle Graham. GO Molecular Function: electron carrier activity
SoyBase N/A ISS
GO:0016705 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
SoyBase N/A ISS
GO:0019825 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxygen binding
SoyBase N/A ISS
GO:0020037 GO-mf
Annotation by Michelle Graham. GO Molecular Function: heme binding
SoyBase N/A ISS
KOG0157
KOG
Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
JGI ISS
PTHR24286 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24286:SF25 Panther
JGI ISS
PF00067 PFAM
Cytochrome P450
JGI ISS
UniRef100_G7L8R4 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome P450 n=1 Tax=Medicago truncatula RepID=G7L8R4_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1K481 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K481_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g30050
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma05g30050
Paralog Evidence Comments
Glyma08g13170 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g30050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g166900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g30050
Coding sequences of Glyma05g30050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g30050.1 sequence type=CDS gene model=Glyma05g30050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACACTAAATCTTATGGAGGTGACCAACCTTGTAGTCTTGCCAGCAGTTTCGGCATTCTTTGTCCTTTGTCTATATTTCATCATTAAAGTTTTCAGACTCGGGAAACATCCAAACCTCAATCTTCCTCCTGGAAGATTAGGATGGCCTGTTGTTGGAGAAACCTTGGAGTTTCTGCGCACAATGAATGAGGGCAACGTGTTAAGGTTCATACAAGAGAGAAAGGAGAAATATGACTCCAGGGTGTTCAAAACTTCAATGTTTGGAGATCCTGTTGTTCTGTTTTGCGGGCCAGCTGGGAACAAGTTCCTATTCAGTAATGAGAACAAGAATGTCCAAGTGTGGTGGCCTAGTTCGGTGAGGAGGTTGTTAAGGTTGTCCTTGGTTAATAAGGTTGGTGATGAGGCAAAGATGGTGAGAAGGTTGCTCATGAGCTTTCTTAATGCAGAAACACTCAGAAACTATTTGCCAAAAATGGATAGCATTGCTCAGCGCCATATAGATACATATTGGGAAGGAAAGGAGCAGGTGTGTGTCTATCCAATAGTACAACTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGACCATATATCAAAGCTTTCGTTAAAATTTGATGAATTTCTGAAAGGGATCATTGGTTTTCCCCTCAACGTTCCTGGAACAAGGTTTTATCGGGCAATGAAAGCTGCAGATGTAATAAGGAAAGAAATTAAAATGATTCTAAAGAAAAGGAAAGTGGATTTGGAGGAGAAGAGGGTATCACCTACTCAGGACCTTCTATCACATATGCTTGTTACATCTGACCCCAGTGGAAGGTTTATGACTGAAATGGAGATTCTTGATAACATTCTTCTTCTACTTTTTGCCGGTCACGATACTTCTAGATCAGTGTTATCATTGGTCATGAAGTATCTTGGACAATTGCCTCAAGTTTATGAACATGTCTTGGAAGAACAACTTGAAATTAGTCAAGGGAAAGAGGCAGGGCAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGCATCTGAAGTCATGAGGCTGTCCCCACCTGTGAGTGGTGCTTACAGAGAAGCTATAAAGGATTTCACCTATGCTGATTATAACATCCCTAAAGGGTGGAAGCTGCATTGGAACACTGGTTCATCACACAAGGACCCAACGCTCTTCTCGAATCCGGAAACTTTTGATGCTTCAAGGTTTGAAGGGGCAGGGCCTACACCCTTTTCATATGTTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCTAGAGTTTGCTAGACTAGAGATTCTTGTGTTCATGCATAATATCGTGAAACGGTTCAAGTGGGATTTGGTGATTCCTGATGAGATGTTCAAGTATGATCCCATGCTAGAACCAATAAAAGGACTTGCAATTCGACTTCATCCTTCCCATTTCTAG
Predicted protein sequences of Glyma05g30050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g30050.1 sequence type=predicted peptide gene model=Glyma05g30050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTLNLMEVTNLVVLPAVSAFFVLCLYFIIKVFRLGKHPNLNLPPGRLGWPVVGETLEFLRTMNEGNVLRFIQERKEKYDSRVFKTSMFGDPVVLFCGPAGNKFLFSNENKNVQVWWPSSVRRLLRLSLVNKVGDEAKMVRRLLMSFLNAETLRNYLPKMDSIAQRHIDTYWEGKEQVCVYPIVQLYTFELACCLFLSIEDSDHISKLSLKFDEFLKGIIGFPLNVPGTRFYRAMKAADVIRKEIKMILKKRKVDLEEKRVSPTQDLLSHMLVTSDPSGRFMTEMEILDNILLLLFAGHDTSRSVLSLVMKYLGQLPQVYEHVLEEQLEISQGKEAGQLLQWEDVQKMKYSWNVASEVMRLSPPVSGAYREAIKDFTYADYNIPKGWKLHWNTGSSHKDPTLFSNPETFDASRFEGAGPTPFSYVPFGGGPRMCLGLEFARLEILVFMHNIVKRFKWDLVIPDEMFKYDPMLEPIKGLAIRLHPSHF*