Report for Sequence Feature Glyma05g29140
Feature Type: gene_model
Chromosome: Gm05
Start: 34805585
stop: 34807707
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g29140
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G18700 AT
Annotation by Michelle Graham. TAIR10: CBL-interacting protein kinase 12 | chr4:10289110-10290579 REVERSE LENGTH=489
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0007165 GO-bp
Annotation by Michelle Graham. GO Biological Process: signal transduction
SoyBase N/A ISS
GO:0010118 GO-bp
Annotation by Michelle Graham. GO Biological Process: stomatal movement
SoyBase N/A ISS
GO:0019722 GO-bp
Annotation by Michelle Graham. GO Biological Process: calcium-mediated signaling
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG0583
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24343 Panther
SERINE/THREONINE KINASE
JGI ISS
PTHR24343:SF45 Panther
SERINE/THREONINE-PROTEIN KINASE PTK1,2/STK1,2
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF03822 PFAM
NAF domain
JGI ISS
UniRef100_I1K3Z8 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K3Z8_SOYBN
SoyBase E_val: 0 ISS
UniRef100_Q84XC0 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Calcineurin B-like-interacting protein kinase n=1 Tax=Pisum sativum RepID=Q84XC0_PEA
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g29140
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma05g29140
Paralog Evidence Comments
Glyma08g12290 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g29140 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g158700 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g29140
Coding sequences of Glyma05g29140
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g29140.1 sequence type=CDS gene model=Glyma05g29140 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCAGAGGTGGCGCCGCCGAAGAAGGAAAACCCGAACCTTCTCCTGGGGCGGTTCGAGCTCGGGAAGCTCCTCGGGCACGGAACCTTCGCGAAGGTCCACCACGCGCGCAACATCAAAACCGGAGAAGGAGTCGCCATCAAGATCATCAACAAGGAGAAAATCCTAAAGGGGGGTTTGGTCTCCCACATAAAGCGCGAGATCTCCATTCTCCGGCGCGTGCGCCACCCCAACATCGTGCAACTCTTCGAAGTGATGGCCACCAAGACCAAGATCTACTTCGTCATGGAGTACGTGCGTGGCGGCGAACTCTTCAACAAGGTCGCAAAGGGAAGATTAAAAGAAGAAGTTGCGAGAAATTACTTTCAGCAGTTAGTTTCCGCGGTGGAGTTTTGCCACGCGCGCGGCGTGTTCCACAGGGACCTGAAGCCCGAGAACCTGTTGCTGGACGAGGATGGGAACCTTAAAGTCTCCGACTTTGGTCTCAGTGCCGTGTCGGATCAGATAAGGCAGGACGGGCTGTTCCACACGTTTTGTGGGACACCTGCGTATGTTGCTCCTGAGGTCTTGTCGCGGAAAGGCTACGATGGTGCAAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTCTGATGGCCGGCTATTTGCCCTTCAATGACCGTAACGTTATGGCTATGTATAAGAAGATTTACAAGGGTGAGTTTCGGTGTCCCAGGTGGTTTTCTTCTGAACTTACAAGACTTCTCTCTAGGCTTCTTGATACTAACCCTCAGACAAGGATTTCTATTCCTGAAGTCATGGAGAATCGCTGGTTCAAGAAGGGTTTCAAGCAGATTAAGTTTTATGTGGAGGATGATAGAGTTTGTAGTTTTGACGAGAAACTGTTACTTCATCATGATGATGATTTGGCAACATCGGATTCTGAGGTTGAGATTAGGAGGAAGAATAGTAATGGTTCGTTGCCGAGGCCTGCGAGTTTGAATGCGTTTGACATCATATCGTTTTCTCAGGGCTTTGATCTATCAGGGTTGTTTGAGGAAAAGGGTGATGAGGCGAGGTTTGTGTCATCTGCTCCGGTGTCGAAGATTATATCAAAATTGGAGGAGGTTGCTCAGTTGGTTAGTTTCAGTGTGAGGAAGAAAGATTGCAGGGTGAGCTTGGAGGGGTGTAGAGAAGGTGTGAAGGGGCCTTTGACTATTGCTGCTGAGGTTTTTGAGTTGACACCTTCCTTGGTGGTGGTGGAGGTCAAGAAAAAGGGAGGGGATAAGGCCGAGTATGAGAAGTTTTGTAACTCTGAGTTGAGACCCGCGTTGGAGAATTTAGGGATGGAGGAATCTGCTTCTTCTTCTTCTTCTTGTCATCAATCTACACACACTCAATCTGAATTCCAACAACATCGAACACTTTCTGACTCTGCCCTTAACAGACATTCAGATAATGAATGTTTGTTCGAACGAGAGTTAGGTCTAGCAGATGAGACTAGTATCTCACAACATGGTGAATCAAAGTTCGAATGTCAACAGGAAAATATGGCCATGTTTACTATCTGA
Predicted protein sequences of Glyma05g29140
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g29140.1 sequence type=predicted peptide gene model=Glyma05g29140 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MAEVAPPKKENPNLLLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKGGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARNYFQQLVSAVEFCHARGVFHRDLKPENLLLDEDGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFNDRNVMAMYKKIYKGEFRCPRWFSSELTRLLSRLLDTNPQTRISIPEVMENRWFKKGFKQIKFYVEDDRVCSFDEKLLLHHDDDLATSDSEVEIRRKNSNGSLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSAPVSKIISKLEEVAQLVSFSVRKKDCRVSLEGCREGVKGPLTIAAEVFELTPSLVVVEVKKKGGDKAEYEKFCNSELRPALENLGMEESASSSSSCHQSTHTQSEFQQHRTLSDSALNRHSDNECLFERELGLADETSISQHGESKFECQQENMAMFTI*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
