Report for Sequence Feature Glyma05g21420
Feature Type: gene_model
Chromosome: Gm05
Start: 26062196
stop: 26066113
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g21420
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT2G23200 AT
Annotation by Michelle Graham. TAIR10: Protein kinase superfamily protein | chr2:9879351-9881855 FORWARD LENGTH=834
SoyBase E_val: 5.00E-149 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0051510 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of unidimensional cell growth
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF785 Panther
JGI ISS
PF07714 PFAM
Protein tyrosine kinase
JGI ISS
UniRef100_C6ZRS9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Protein kinase family protein n=1 Tax=Glycine max RepID=C6ZRS9_SOYBN
SoyBase E_val: 0 ISS
UniRef100_I1K287 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein (Fragment) n=1 Tax=Glycine max RepID=I1K287_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g21420
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma05g21420 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g099900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g21420
Coding sequences of Glyma05g21420
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g21420.1 sequence type=CDS gene model=Glyma05g21420 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
TTCCCTTCACACGGGTACACCGTTCCGGATAAGTACTTTAACAATTGTGGCTCAGACAGCAGTGCTAGCAAAAGTGGCAAGAATTACGTTGGTGAATCAAACCTTAAAACCAGTTTTGGCAGCAGCAACACAGAAAGGAGTGAGTCACAGGTGCCTTCTCCTCTTTACCAAACTGCAAAAAAATTTCGAAGTGAGGCTTCTGGGTATAAGTTCAACATCAACGTGGCACCTACCTGTAATCTTTCCTCGGCCAGTTTCAATGTTTCTGTTCCCGGTTTCTGGTTGTTGCGAAATTTCAATGGTAGAAATGATAGCGATAACAACTCTGCTGTAGTAAAAGAGTTTTTCATGCAAATTACTTCCGGCAGCTTCAAAATCACTTTTAGACCTCTTCCATCATCGTTTGCGTTTGTGAATGCTATTGAACTCTTCATACTCCCCATCCATTTGACTGCCAATCAAGTATCACGTTTCACTTATAGTGGCAATACGTCTTTAGATCCCCTCAGCGGAGGTTTGGTCAATGATAGCTTATTGAGAAAATGGAATCCAGATGATAGCTATATCTTAAATACGGAAAACGCCAAGAATCGTTCCCCTTACCTGGGTCCAATTCAGTACCGTGTAGGGAATGACTCAGATGGTTCAAACGCAAATGAATATACTGCGCCAAGTGATGTGTACGGAACTGCTAAAGAAATTAATAGCAGCTCTTCCAGTGCTGGAAACATAACATGGGCTCTTCTCGTGGACAACAACGCAGATCATCTTCTTCGGCTTCACTTCTGTGACTATTGGAGTCCACAAAATGATCTTAAATACTTCGATCTGTCCATTTACGACACCTATGTCATGTCCGTAAATATTGATAACCAGGAGTTGCCTGCCCCTTATTATTATGATTTTGTGGTACACTCTGATGACTCTGGGTTTATGAAGGTCAGCATAGCACCTGATGCATCCGCTCCCATACCTAATGCATTTTTAAATGGGCTAGAAATAATGAAAGTGATTATGACATCAAGTTCTGTTCCCCTCGACCAGGAACCCTATTCCAATCATAATAGTCTTCCAGTGGTGCTGGGTTCAGTTATTGGAGGTTTAGTTGTGGTTTTTGCTGTAGTGATTCTAGGCTTTCTTTGGCGTTTTAAAATGAGAAAGGAAAAGCCCGTTGAGAATTCGGACTGGTTGCCAATTCCCATTACTGCTGGAGGGAGTTCTCACGGCAGATTGACTGATGGAACCAGCCACGGCTCTCCTCTTCCCAACATAAGCCTCAGGCTGAAAAGTCCCTTGATTGATCTTCAATTAGCAACCAAGAACTTCCATGCAAGTCAGCTAATTGGCGAGGGTGATTTTGGCAACGTCTATAAGGGAGTTCTCAGAAATGGCATCATATTCGCCGTGAAAAGAAGCCAGCCAGGATCAGTTTCCCTAAGTGGGTATTGTGATGAAAGGTTCGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACACTCAGGGACCATTTGTATAATACAAAGTTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTTCCAGGGGTTTTCATTACCTTCACAAAGGAGCATCTAGGGGAATAATTCACCCTGAGAACCTTGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGATACTCAACCGTATGTGAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTACTTCAGGTCACAACAGCTAACAGAAAAATCTGATGTATATTCATTTGGGGTAGTTCTTTTGAAAGTGTTGTGTGCAAGAGCACCGATTAACCCATTGCTTCCAAGAGACCAAATAAACTTGGCTGAATGGGGAATGCTTTGCAAAAACAAGGGGATACTGAAATTTAGTGACACGGTAGAGAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAAGCATGGATGATGTATTGTGGGACTTGGGGTATGCGCTTCAGCTTCAGAGAGGTGCAAATGCAATACATAAAGTGCAGCATGAGGATAGTTCTAGTAGTGTTTCTGCATCATTTCAATTGCCCAATGTTAGACATCTTCCTTCATTCTCCACACTAAGTGAAGCAGATGACTCCGTTGTGAGGGGTGATAAGTCCAATAGTGCTGAGGATTTTGTTTTCTCCCAGTTGAAAATGGAAGACGCCAGATAG
Predicted protein sequences of Glyma05g21420
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g21420.1 sequence type=predicted peptide gene model=Glyma05g21420 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
FPSHGYTVPDKYFNNCGSDSSASKSGKNYVGESNLKTSFGSSNTERSESQVPSPLYQTAKKFRSEASGYKFNINVAPTCNLSSASFNVSVPGFWLLRNFNGRNDSDNNSAVVKEFFMQITSGSFKITFRPLPSSFAFVNAIELFILPIHLTANQVSRFTYSGNTSLDPLSGGLVNDSLLRKWNPDDSYILNTENAKNRSPYLGPIQYRVGNDSDGSNANEYTAPSDVYGTAKEINSSSSSAGNITWALLVDNNADHLLRLHFCDYWSPQNDLKYFDLSIYDTYVMSVNIDNQELPAPYYYDFVVHSDDSGFMKVSIAPDASAPIPNAFLNGLEIMKVIMTSSSVPLDQEPYSNHNSLPVVLGSVIGGLVVVFAVVILGFLWRFKMRKEKPVENSDWLPIPITAGGSSHGRLTDGTSHGSPLPNISLRLKSPLIDLQLATKNFHASQLIGEGDFGNVYKGVLRNGIIFAVKRSQPGSVSLSGYCDERFEMILVYEYMEKGTLRDHLYNTKLPSLPWKQRLEICIGASRGFHYLHKGASRGIIHPENLVAKVADFGLSRSGPLDTQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLKVLCARAPINPLLPRDQINLAEWGMLCKNKGILKFSDTVEKCLQEDGSDRPSMDDVLWDLGYALQLQRGANAIHKVQHEDSSSSVSASFQLPNVRHLPSFSTLSEADDSVVRGDKSNSAEDFVFSQLKMEDAR*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
