|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT3G27670 | AT | Annotation by Michelle Graham. TAIR10: ARM repeat superfamily protein | chr3:10245338-10253158 FORWARD LENGTH=1841 | SoyBase | E_val: 4.00E-22 | ISS |
GO:0006486 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein glycosylation | SoyBase | N/A | ISS |
GO:0006723 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cuticle hydrocarbon biosynthetic process | SoyBase | N/A | ISS |
GO:0007062 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sister chromatid cohesion | SoyBase | N/A | ISS |
GO:0009640 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photomorphogenesis | SoyBase | N/A | ISS |
GO:0009793 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryo development ending in seed dormancy | SoyBase | N/A | ISS |
GO:0009845 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed germination | SoyBase | N/A | ISS |
GO:0009880 | GO-bp | Annotation by Michelle Graham. GO Biological Process: embryonic pattern specification | SoyBase | N/A | ISS |
GO:0009909 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of flower development | SoyBase | N/A | ISS |
GO:0009933 | GO-bp | Annotation by Michelle Graham. GO Biological Process: meristem structural organization | SoyBase | N/A | ISS |
GO:0010072 | GO-bp | Annotation by Michelle Graham. GO Biological Process: primary shoot apical meristem specification | SoyBase | N/A | ISS |
GO:0010162 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed dormancy process | SoyBase | N/A | ISS |
GO:0010182 | GO-bp | Annotation by Michelle Graham. GO Biological Process: sugar mediated signaling pathway | SoyBase | N/A | ISS |
GO:0010228 | GO-bp | Annotation by Michelle Graham. GO Biological Process: vegetative to reproductive phase transition of meristem | SoyBase | N/A | ISS |
GO:0010413 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glucuronoxylan metabolic process | SoyBase | N/A | ISS |
GO:0010431 | GO-bp | Annotation by Michelle Graham. GO Biological Process: seed maturation | SoyBase | N/A | ISS |
GO:0010564 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell cycle process | SoyBase | N/A | ISS |
GO:0016567 | GO-bp | Annotation by Michelle Graham. GO Biological Process: protein ubiquitination | SoyBase | N/A | ISS |
GO:0019915 | GO-bp | Annotation by Michelle Graham. GO Biological Process: lipid storage | SoyBase | N/A | ISS |
GO:0045492 | GO-bp | Annotation by Michelle Graham. GO Biological Process: xylan biosynthetic process | SoyBase | N/A | ISS |
GO:0045595 | GO-bp | Annotation by Michelle Graham. GO Biological Process: regulation of cell differentiation | SoyBase | N/A | ISS |
GO:0048366 | GO-bp | Annotation by Michelle Graham. GO Biological Process: leaf development | SoyBase | N/A | ISS |
GO:0048825 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cotyledon development | SoyBase | N/A | ISS |
GO:0050826 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to freezing | SoyBase | N/A | ISS |
GO:0051301 | GO-bp | Annotation by Michelle Graham. GO Biological Process: cell division | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
PTHR16212 | Panther | FAMILY NOT NAMED | JGI | ISS | |
PTHR16212:SF4 | Panther | SUBFAMILY NOT NAMED | JGI | ISS | |
UniRef100_F4IWL6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Protein resurrection1 n=1 Tax=Arabidopsis thaliana RepID=F4IWL6_ARATH | SoyBase | E_val: 2.00E-19 | ISS |
UniRef100_I1N5I9 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1N5I9_SOYBN | SoyBase | E_val: 4.00E-33 | ISS |
Glyma05g19600 not represented in the dataset |
Glyma05g19600 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.05g094100 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma05g19600.1 sequence type=CDS gene model=Glyma05g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high GACAACAACATATCTTCTTGTGCACCTCATATATTGATGCTTACTCTGGAGAAGGTTTGCAAGGCCAGAGTGAGTCAATTCTCTAATAATTTGGTTAGTAATGTATCTTGTGTTTTGCCTCCATCTGTTCACATGGTTAAGTCTGCTGCTTCAAAGTTCCTTTTGGAATGGTTGTTCCAACATGAGCATGAACACCGCCAATGGTCTGCTGCAGTTTCTCTTGGATTAATCTCTAGTTGCCTTCATGTAACAGATCATAAAGAGAGATATCATAACATCACAGGACTTCTTGAGGTATTCTTGTTCAATCCTTTTTGTGTATGTCTATTGTCCCATTTTTTTAAAGATCTTGATTATCTTTATTCTTATCGATATTTATTTCTCAGTCCATATTTAATGCTAGTGGGAGTGGTGAATGACTTAGCTGGTTGGGATATATGGATTTTTCTGTATATGAAGTCTTCTGCATTCATTAATTGTCCACTCTTAGCAAATTGTTTTCATTTGTTATTTTTAAACCTTTCGCTCTCGGCAAATTTGAAAGAGGTTGATGTTACTTGTCTCAACCTATGCTTTCTTAATTTAAGGTATGGTTGA
>Glyma05g19600.1 sequence type=predicted peptide gene model=Glyma05g19600 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high DNNISSCAPHILMLTLEKVCKARVSQFSNNLVSNVSCVLPPSVHMVKSAASKFLLEWLFQHEHEHRQWSAAVSLGLISSCLHVTDHKERYHNITGLLEVFLFNPFCVCLLSHFFKDLDYLYSYRYLFLSPYLMLVGVVNDLAGWDIWIFLYMKSSAFINCPLLANCFHLLFLNLSLSANLKEVDVTCLNLCFLNLRYG*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||