Report for Sequence Feature Glyma05g14820
Feature Type: gene_model
Chromosome: Gm05
Start: 16059826
stop: 16062130
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g14820
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G50120 AT
Annotation by Michelle Graham. TAIR10: Plant protein of unknown function (DUF247) | chr3:18585157-18587246 REVERSE LENGTH=531
SoyBase E_val: 6.00E-50 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
PF03140 PFAM
Plant protein of unknown function
JGI ISS
UniRef100_UPI0002339584 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI0002339584 related cluster n=1 Tax=unknown RepID=UPI0002339584
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g14820
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma05g14820 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g076600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g14820
Coding sequences of Glyma05g14820
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g14820.1 sequence type=CDS gene model=Glyma05g14820 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGACTGAAACACCACACCTCAGCATAAAGTTTACCCAACTAGAAAAAGCAAAGCTAATACCACAAACTTCAGCCCCAAAGATACAAAGGGTAGCACATTATCTCCGAGATCGAAAACATTTTGCCAAGCATTACTCACCCAGGTTGGTGTCAATTGGTCCAATCCATCATGGTGCAAAGAACCTACTGCTGGGAGAAAAATACAAGCTTATGTGGACAGCAAGGTATCTCGAACGCACCAACCAGGATGCTCAAACTCTGTACCAAAAGATTGCATCAAATATCAAACAACTGAAGGAACTGTTTGCTGAGGATGTCATTGCAGACTTCCCTGATGATGAAAAGCTGTCATGGATGCTACTTGTGGATGGATGTTCTCTGCTACAAATCTTGGAAAAGGGAAAACTTGACTATCCAGAAGAAATGAATGTTAAGGTTGACCAACTAGTTCTTGTGTGGCAAGATGTGCTTTTGTTAGAGAACCAGCTTCCCTATCAAGTGCTTAAACTGTTGACTGGCCCCGAGAATGAAGCCATGCTATTAAACATCATGAAGGAGTTTCTTAAGTGTCATCATTTGTCACCAGTTAGACCAAATCACAGAGCAAAGACACAAGACATGGACAAGGATATAACCAAGCAAGAAGACAGAGCATTCACTGAAGAAGGGTGCACAAGTGTGTGTACAAAGAATGAAAGCACCCTGCAAGGAGAACATAGAGTGGAAATACCTCAGGAACCACCTATTCATCTTCTCGATCAGCTTCGCAGAACTGTTATTCATGACCCTCAGAAGAACCACCAAGATCACCGAAAGAAGGACACAACAAGCAAGAAAAAGAAATGCAAGCAGAACAAAAAAAATGAAGATTCCGACATTATAACATACAGGAACATAAAGGAGTTGAGAGCAGCAGGGATTAGCCTGAAGAAAAGCAACTCACGCAGGATCAAAGACACCTCTTTCTCTTGTGGCTGGTTGTATGCAGAACTGAAGCTTCCTGAGATCACAGTTGATGACACAACAGCCCCCTCATTTCTCAACTTGATAGCGTACGAGATGTGTCCAGATTTTACGAACAACTATGAGATATGTTCTTTCGTAGCCTTCATAGACTCGCTTATTGACAACCCAGATGATGTGAAGGAGCTGCGAAAAGCAGGGATTCTTCTCAACATGCTTGGGAGTGACGAGGAAGTGGCTAATCTCTTCAATACAATAAGTGCTGATTTGGTGCCCAACATGGAGGGTTATTCACATGTTAGACCCCAAATTGAGAGGCATTATAGGAACAAATGCAAGACGTGGATAGCTCTTGGTTCTCATACCTATTTTAGTAACCCTTGGGCAATCATTGCTTTCCATGCTGCTGTTTTAGCTATTGTTCTAACTTTCATCCAAACTTGGTATGCTATTCACCCTGCTCATGCTGGCTAA
Predicted protein sequences of Glyma05g14820
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g14820.1 sequence type=predicted peptide gene model=Glyma05g14820 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MTETPHLSIKFTQLEKAKLIPQTSAPKIQRVAHYLRDRKHFAKHYSPRLVSIGPIHHGAKNLLLGEKYKLMWTARYLERTNQDAQTLYQKIASNIKQLKELFAEDVIADFPDDEKLSWMLLVDGCSLLQILEKGKLDYPEEMNVKVDQLVLVWQDVLLLENQLPYQVLKLLTGPENEAMLLNIMKEFLKCHHLSPVRPNHRAKTQDMDKDITKQEDRAFTEEGCTSVCTKNESTLQGEHRVEIPQEPPIHLLDQLRRTVIHDPQKNHQDHRKKDTTSKKKKCKQNKKNEDSDIITYRNIKELRAAGISLKKSNSRRIKDTSFSCGWLYAELKLPEITVDDTTAPSFLNLIAYEMCPDFTNNYEICSFVAFIDSLIDNPDDVKELRKAGILLNMLGSDEEVANLFNTISADLVPNMEGYSHVRPQIERHYRNKCKTWIALGSHTYFSNPWAIIAFHAAVLAIVLTFIQTWYAIHPAHAG*