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Report for Sequence Feature Glyma05g14791

Feature Type:gene_model
Chromosome:Gm05
Start:15994025
stop:15995802
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G20010AT Annotation by Michelle Graham. TAIR10: plastid transcriptionally active 9 | chr4:10842128-10843989 FORWARD LENGTH=371 SoyBaseE_val: 8.00E-36ISS
GO:0008150GO-bp Annotation by Michelle Graham. GO Biological Process: biological process SoyBaseN/AISS
GO:0009295GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleoid SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0009508GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plastid chromosome SoyBaseN/AISS
GO:0003697GO-mf Annotation by Michelle Graham. GO Molecular Function: single-stranded DNA binding SoyBaseN/AISS
UniRef100_C6T7T9UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=C6T7T9_SOYBN SoyBaseE_val: 2.00E-69ISS
UniRef100_Q8GXH3UniRef Annotation by Michelle Graham. Most informative UniRef hit: Protein OSB2, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=OSB2_ARATH SoyBaseE_val: 4.00E-33ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g14791 not represented in the dataset

Glyma05g14791 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.05g076800 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma05g14791.1   sequence type=CDS   gene model=Glyma05g14791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGGAGATCCAGACGCCGATACCGATAATCCTGTTTTGAAAGAAGAGCAAGATGCCCAAGTAAAACCAAAGCACCCTGATTTCAAACGCAAGGATCGCAATTCTCTCTGGCTTGGCAAGGATGAAAAGTGGGTTTTGCCTAAATTGGAAGGACTTCAATTTGATGTTCCAACTGCTATATCCAAAAAAGGTGATGGTGGTGAGCCCTGTAATGATTTGGTGCAAAACTATGCTAACTGGTGGGATAATAGATTAAATAAGAGGAATGCAAAAGCTCCCGATTTCAAGCACAAAGAAACCGGTAAAGGGTTGTGGCTTGATTCTTCATCAGAGTGGGTTTTGGAAAAATTGCCGCCACCTCTGAAGCCTAAACAAAGTGTAGATACTGAAAGGACACTGGTTTCATAA

>Glyma05g14791.1   sequence type=predicted peptide   gene model=Glyma05g14791   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MGDPDADTDNPVLKEEQDAQVKPKHPDFKRKDRNSLWLGKDEKWVLPKLEGLQFDVPTAISKKGDGGEPCNDLVQNYANWWDNRLNKRNAKAPDFKHKETGKGLWLDSSSEWVLEKLPPPLKPKQSVDTERTLVS*







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