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Report for Sequence Feature Glyma05g14455

Feature Type:gene_model
Chromosome:Gm05
Start:15556690
stop:15557446
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma05g14455
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G04930AT Annotation by Michelle Graham. TAIR10: DNA-binding storekeeper protein-related transcriptional regulator | chr3:1363029-1364651 FORWARD LENGTH=396 SoyBaseE_val: 1.00E-37ISS
GO:0006355GO-bp Annotation by Michelle Graham. GO Biological Process: regulation of transcription, DNA-dependent SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
PF04504PFAM Protein of unknown function, DUF573 JGI ISS
UniRef100_B9RET1UniRef Annotation by Michelle Graham. Most informative UniRef hit: Transcription regulator, putative n=1 Tax=Ricinus communis RepID=B9RET1_RICCO SoyBaseE_val: 2.00E-45ISS
UniRef100_I1JRL2UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JRL2_SOYBN SoyBaseE_val: 8.00E-95ISS

Expression Patterns of Glyma05g14455
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma05g14455 not represented in the dataset
Glyma05g14455 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma05g14455 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma05g14455
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma05g14455
>Glyma05g14455.1   sequence type=CDS   gene model=Glyma05g14455   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCAAGACGAGATCGAGCTCTTGCAAGGGTTCCTCTACTACACATCGCAGCAAGGATCATCGCACCACAGCGACACTGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTCGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGGAACGTCCTTAACAACATTTTCTCTGGCAAGGAATTCTCCTTCAAGAGCGCTCACGATCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCAACGTGACTCCAGTCGGCGACAATTCATTGGACGACGACGAAATCAACCCTAATCGTAGCCCCAACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAGAATGAAATGATTTTCAGGAATTCCACGGAGAAGAAAACACCGAAACGCTCTCGACCTCGATCGGCAATGAAAATCGAGCCAAATGAATTGAGTGCAAAATGA
Predicted protein sequences of Glyma05g14455
>Glyma05g14455.1   sequence type=predicted peptide   gene model=Glyma05g14455   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MQDEIELLQGFLYYTSQQGSSHHSDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNNIFSGKEFSFKSAHDQATFEISRKIWSNVTPVGDNSLDDDEINPNRSPNPNLNFSPVILKNEMIFRNSTEKKTPKRSRPRSAMKIEPNELSAK*






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