Report for Sequence Feature Glyma05g10050
Feature Type: gene_model
Chromosome: Gm05
Start: 9994115
stop: 9999794
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g10050
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G66850 AT
Annotation by Michelle Graham. TAIR10: mitogen-activated protein kinase kinase kinase 5 | chr5:26695965-26699159 REVERSE LENGTH=716
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0046777 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein autophosphorylation
SoyBase N/A ISS
GO:0005886 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG0198
KOG
MEKK and related serine/threonine protein kinases
JGI ISS
PTHR24361 Panther
MITOGEN-ACTIVATED KINASE KINASE KINASE
JGI ISS
PTHR24361:SF62 Panther
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
UniRef100_G7K825 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Mitogen-activated protein kinase kinase kinase A n=1 Tax=Medicago truncatula RepID=G7K825_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233E25F UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233E25F related cluster n=1 Tax=unknown RepID=UPI000233E25F
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g10050
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma05g10050
Paralog Evidence Comments
Glyma17g20460 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g10050 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g080900 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g10050
Coding sequences of Glyma05g10050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g10050.2 sequence type=CDS gene model=Glyma05g10050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAGGTGGTTGCCCACGCTTTCGTTCTCCCCTTCGAATTCTTCTTCATCTTCTTCGTCGTCTTCTTCTGCCTCCGCTGCTTCCGCCGTGGATCACCGCCGGAAGGCGTGGCTCTTCGGAAATTCGTCGAAGAAGCGCGCCTGCCACGTCGGCGACCACGACGAAGATGCACTAGTTTCTTCCCCCGGCACGCCTCAGCAGTTGCCTCTGCCGGAGCTCTCCGCCGCCGCCGTGCTCCGTCAACAAGACGGTGAGTGCCGCCTTCCCTCGCCCAAGGACGCTGCACCCACCACCACCGGCTTTCGGATGAGGAGTGTTTTTGCTAGCCAAGAGACAAGAAGAAATATGGAGCAGGCTGAAACTAGGTCACCGAGAATGGTGCAGCAAGATGCAAGTGGTTGCAGTGAGAGTGCTCGAGATAATAGTAATAATAACTTGGTGAATGTCCCTCGTAGGAGGAGTATTTCAGGTAGTTCTTCTGCAAGTCCTTCAATGAGTCCTCAGAAAACAAGGAATGGTGATTTTGTGCCATATTATTACACGTATTCCAAAGGAAATCAGTTCTGGTCCGCACCAGAAATGCCTTCTTGTGAAGCAGGGTTGCTACCTCCTGCCTTCTTTGATTTATCCGCGTTAAGCACAGAAGCTTCCCTTTCTCCCAACTCCCATCAAAGTCTACAGATGAAAAGTTCCCAGAAACACACCAGAACTTTTAGTGGACCTCCATCCCCCATACATTCCATGTTACCACTTGAGATCTCAACAGCACGCCATGAAAGTAATGCTCCTCCTGTCGGTGTTCACCCATTGCCCCTGCCTCCTGGAGCTGCCTTGACCTCACCGCCTGCTGCTGCTACCTTTTCCCATGCCGTGGCTAAGTCAGAATCGTTCCCAATGAAAAGCCAATGGAAGAAAGGGAAACTTATTGGGCGTGGGACGTTTGGAAGCGTTTATGTCGCAACCAATAGGGAAACCGGAGCATTATGTGCAATGAAGGAAGTAGAGTTATTTCCTGATGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCAATCTAAAACATTCAAACATCGTACAGTATTATGGCAGTGAAATAGTTGAGGACCGGTTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGAACATTGTGGTGCCATAACAGAATCTGTTATTCGGAATTTCACTCGGCATATTCTCTCAGGGTTGGCTTATTTACATAGCAAAAAAACCATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTAGCTGATTTTGGGATGGCTAAGCATCTTACTGGGTTTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACCATCATTGAAATGTTCACTGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTGTTTAAGGTTATGAAGGAGACCCCTCCTATACCTGAAACACTGTCATCTGAGGGTAAAGATTTTTTGAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGCCAACAGCTGCGGTTTTACTAGAACATCGATTTTTGAAAAACTCGCAACTGCTGGATGTTTTATCTTCCACCCAGCTGTATAATGAAACAAGCTTCATGGACAAACCACATACTCCAAGTAGGCAATCTGAAAATAGTTATGATCAGTTGTCAACCCCCTGTGCAAAGATTGCAAAGGGTAAAGCTGCTGAGAGGCGAGGATTTCTCATTTCTTCGTTTGATATTCTCCCTGCATACTTGGACCAATAA
Predicted protein sequences of Glyma05g10050
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g10050.2 sequence type=predicted peptide gene model=Glyma05g10050 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MRWLPTLSFSPSNSSSSSSSSSSASAASAVDHRRKAWLFGNSSKKRACHVGDHDEDALVSSPGTPQQLPLPELSAAAVLRQQDGECRLPSPKDAAPTTTGFRMRSVFASQETRRNMEQAETRSPRMVQQDASGCSESARDNSNNNLVNVPRRRSISGSSSASPSMSPQKTRNGDFVPYYYTYSKGNQFWSAPEMPSCEAGLLPPAFFDLSALSTEASLSPNSHQSLQMKSSQKHTRTFSGPPSPIHSMLPLEISTARHESNAPPVGVHPLPLPPGAALTSPPAAATFSHAVAKSESFPMKSQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVELFPDDPKSAECIKQLEQEIKVLSNLKHSNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGFEANLSLRGSPYWMAPELLQAVIQKDNSPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSSEGKDFLRCCFKRNPAERPTAAVLLEHRFLKNSQLLDVLSSTQLYNETSFMDKPHTPSRQSENSYDQLSTPCAKIAKGKAAERRGFLISSFDILPAYLDQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
