Report for Sequence Feature Glyma05g09130
Feature Type: gene_model
Chromosome: Gm05
Start: 8932590
stop: 8935817
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g09130
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G01640 AT
Annotation by Michelle Graham. TAIR10: glucuronokinase G | chr3:239418-241198 FORWARD LENGTH=362
SoyBase E_val: 0 ISS
GO:0006020 GO-bp
Annotation by Michelle Graham. GO Biological Process: inositol metabolic process
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0042546 GO-bp
Annotation by Michelle Graham. GO Biological Process: cell wall biogenesis
SoyBase N/A ISS
GO:0048868 GO-bp
Annotation by Michelle Graham. GO Biological Process: pollen tube development
SoyBase N/A ISS
GO:0005737 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0008266 GO-mf
Annotation by Michelle Graham. GO Molecular Function: poly(U) RNA binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016773 GO-mf
Annotation by Michelle Graham. GO Molecular Function: phosphotransferase activity, alcohol group as acceptor
SoyBase N/A ISS
GO:0047940 GO-mf
Annotation by Michelle Graham. GO Molecular Function: glucuronokinase activity
SoyBase N/A ISS
PF00288 PFAM
GHMP kinases N terminal domain
JGI ISS
PF08544 PFAM
GHMP kinases C terminal
JGI ISS
UniRef100_B9S667 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S667_RICCO
SoyBase E_val: 0 ISS
UniRef100_I1K1M4 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1K1M4_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g09130
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma05g09130
Paralog Evidence Comments
Glyma19g00661 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g09130 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g002500 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g09130
Coding sequences of Glyma05g09130
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g09130.1 sequence type=CDS gene model=Glyma05g09130 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGGCATTGATAGTGAATACGTGATATCTCACAAGGCCTATGCGAGGGTGGGATTGCTTGGGAACCCGAGCGATGTCTACTACGGCAAAACGATAGCGTTAAGCGTCGCCAACTTCTTCGCCACCGTCACGCTGCGTCCCTCCGACCAGTTAATCCTCCAACCCCACCCCCTCCACGATCTCCTTCATTTCTCATCGCTCCCTCAATTGGTCAACAGGTTGAGCTCCCAAGGTTACTATGGAGGCGTGCGATTGCTTATGGCTATTTGCAATGTCTTCTACGCGTATTGCAGAGAGAACGCCATCGATCTTGGCGACGACAATTTCACTCTCTCCTACGACACCAATATCCCTCGCCAGGCTGGTCTTTCGGGTTCTAGCGGGATCGTGTGTGCTGCGTTGAACTGTTTGTTGGATTTCTACAACGTCAGGCATCTGGTCAAGGTGGAGGTCAGGCCTAACCTCATCCTCGCTGCCGAGAAAGAACTCGGGATTGTGGCCGGTCTTCAGGATCGGGTCGCACAAGTTTACGGTGGCCTTGTTTACATGGACTTTAGCAAGGAAAACATGAATGAGCTGGGCCATGGAGTTTATGTACCAGTGGATTTGAGTCTCCTCCCTCCTCTGTATCTCATCTATGCGGAAAATCCTAGTGATTCTGGCAAGGTTCATAGTAAAGTACGGCAGAGGTGGCTTGATGGTGATGAGTTCATTGTGTCTTCCATGCTTGAAATTGCTAATATCGCCCAAGAAGGAAAGACTGCATTAGAAGAAAAGGACTACTCCAAATTTGCAGCTCTCATGAATCGAAATTTTGACCTGCGAAGGTTAATGTTTGGAGATGATGCCCTCGGTGATTTGAACCTAAAAATGGTAGAGGTTGCCAGAAAGGTTGGAGCTGCGTCAAAATTTACCGGTAGCGGAGGAGCTGTTGTTGCATTTTGTCCTGAGGGGACTTCTCAAGTGAAGCTTCTCGAGGACGAATGTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTCTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAA
Predicted protein sequences of Glyma05g09130
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g09130.1 sequence type=predicted peptide gene model=Glyma05g09130 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MGIDSEYVISHKAYARVGLLGNPSDVYYGKTIALSVANFFATVTLRPSDQLILQPHPLHDLLHFSSLPQLVNRLSSQGYYGGVRLLMAICNVFYAYCRENAIDLGDDNFTLSYDTNIPRQAGLSGSSGIVCAALNCLLDFYNVRHLVKVEVRPNLILAAEKELGIVAGLQDRVAQVYGGLVYMDFSKENMNELGHGVYVPVDLSLLPPLYLIYAENPSDSGKVHSKVRQRWLDGDEFIVSSMLEIANIAQEGKTALEEKDYSKFAALMNRNFDLRRLMFGDDALGDLNLKMVEVARKVGAASKFTGSGGAVVAFCPEGTSQVKLLEDECQKEGFVILPIEPLPSRLNEIDLKTLQIK*