Report for Sequence Feature Glyma05g08790
Feature Type: gene_model
Chromosome: Gm05
Start: 8676467
stop: 8681066
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g08790
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G40380 AT
Annotation by Michelle Graham. TAIR10: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 | chr5:16152121-16155038 FORWARD LENGTH=651
SoyBase E_val: 0 ISS
GO:0006468 GO-bp
Annotation by Michelle Graham. GO Biological Process: protein phosphorylation
SoyBase N/A ISS
GO:0004672 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein kinase activity
SoyBase N/A ISS
GO:0004674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein serine/threonine kinase activity
SoyBase N/A ISS
GO:0005524 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ATP binding
SoyBase N/A ISS
GO:0016301 GO-mf
Annotation by Michelle Graham. GO Molecular Function: kinase activity
SoyBase N/A ISS
GO:0016772 GO-mf
Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring phosphorus-containing groups
SoyBase N/A ISS
KOG1187
KOG
Serine/threonine protein kinase
JGI ISS
PTHR24420 Panther
FAMILY NOT NAMED
JGI ISS
PTHR24420:SF433 Panther
SUBFAMILY NOT NAMED
JGI ISS
PF00069 PFAM
Protein kinase domain
JGI ISS
PF01657 PFAM
Domain of unknown function DUF26
JGI ISS
UniRef100_B9SF98 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SF98_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233A88E UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A88E related cluster n=1 Tax=unknown RepID=UPI000233A88E
SoyBase E_val: 0 ISS
Expression Patterns of Glyma05g08790
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma05g08790
Paralog Evidence Comments
Glyma19g00300 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g08790 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g005100 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g08790
Coding sequences of Glyma05g08790
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g08790.2 sequence type=CDS gene model=Glyma05g08790 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGCTTCCAAATATGATAACAAGTACAACAATCCATCATTTGTTGTTGTTATCTTCACAGTGGCCACCCTATTGTGTTTTTTCTCCCACTCAGCACTATCTGATCCAAGAATCTCAGAAGTGGGGCACTACTGCAGCACACAGAAGTCACCAACAAGTGGTGATTACTTCCCCATATTCACCAAAGAAATGGAAAAACTTCAAGAAGTTGTGACAAAACAAAACTGGGGAACTCACTCTGAGGGCATGTCATCAACCACTCCTATCTATGGCTTGGCACAATGCTTCCAAGACCTTTCCAGCATTGATTGCCTTCAGTGCTTTGCATCCAGCCGCACCAAGCTCCCTCGCTGCCTCCCTTCGGTTTCGGCTCGAATTTACCTTGATGGCTGCTTCCTTCGCTATGACAACTACAGTTTCTACACTGAGGACACTGACCCTTTGAGGGACACAGTGAACTGCACCTCACAGTATGGTGCTGTGGTTGGTGATGGTGAGAAGTTGGTGTTTGCTGAGAGTGTTGCCAAAGTGGTTGAGAGTGTGGTGAGGGTGGCTGTGAATGAGGGAAGAGGCATTTTTGCAGTGGGAGAAGGTGGGGGAGTTTATGCCTTGGCACAGTGCTGGAAAACTGTTGGGGTAAAAGGGTGTAGTGATTGCTTAAGGAAAGCTGAAAATGAAGTTAAAGGGTGTTTGCCTAAGAGGGAAGGGAGGGCCTTGAATACTGGGTGTTATTTGAGATATTCAACTGTTAAGTTCTACAATCAAGGAGGTGAAGATGGCCAAGGAGATGATTCTTCCAGAAAACGAGCCATCGTAGCAGCAGGGTCAGTCTTGGCTGCAGCTGTTGTAGTGCTCACGCTCGCGGCCTCTTATGTGGCCTTCACCAAAAAGAGAAAAAAAAACAATTTTATCGAGGCTCCTCCTTCCTTAAAGAATTCTAGCTTGAATTACAAATATGAAACTCTTGAGAAGGCCACAGATTATTTCAGCTCTTCAAGAAAAATAGGCCAAGGAGGAGCTGGTTCTGTATACAAAGGGACTTTGCCAAATGGGAATGATGTTGCTGTTAAGAGATTGGTCTTCAATAATAGGCAATGGGTGGATGATTTCTTCAATGAAGTGAATTTGATTAGTGGAATGCAACACAAGAACCTTGTCAAACTATTGGGCTGTAGCATTGAAGGCCCTGAGAGCCTCATTGTGTATGAGTACCTACCTAACAAGAGCTTAGATCAATTCATTTTTGAAAAGGACATAACAAGGATTCTTAAATGGAAGCAGCGGTTTGAAATAATTCTTGGAACTGCAGAAGGACTTGCATATCTTCATGGAGGCTCTGAAATAAGAATCATTCATCGAGACATAAAGAGTAGCAATGTTCTTCTGGATGAGAATCTTAACCCCAAGATTGCAGATTTTGGTCTTGCCCGGTGTTTCGGTACTGATAAAACGCATCTAAGCACTGGAATTGCTGGAACATTAGGTTACATGGCTCCTGAGTATCTCATTCAAGGACAACTTACAGATAAAGCAGATGTCTATAGTTTTGGAGTACTTGTTCTGGAGATTGCAAGTGGAAGGAAGAATAATGTCTTCCGTGAGGATTCTGGTTCCCTTTTGCAAACAGTTTGGAAACTTTACCAATCAAACAGATTGGGTGAAGCTGTTGATCCTGGCTTGGGAGAAGATTTTCCTGCAAGAGAAGCATCAAGGGTGTTTCAAATTGGATTGCTATGCACACAAGCTTCTGCTTCCCTGAGGCCATCCATGACTCAAGTTGTTAGCATCTTAAGTAATTCAAATTTGGATGCCCCTATACCAAAACAACCTCCATTTTTGAACTCTAGATTGCTAGATCAAGCATCTCCATTAGGTTTTAGCATAGGCAGCTCCTCATCAAACACATTTAAGAAGACTGGTGTGTCCTACAGCCCCTCTGAGTTCTCTAGCACATGCAGCTTAATTGGGCCAACAAGAAATGAAGAAACAATTATGGAAGCTTGA
Predicted protein sequences of Glyma05g08790
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g08790.2 sequence type=predicted peptide gene model=Glyma05g08790 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MASKYDNKYNNPSFVVVIFTVATLLCFFSHSALSDPRISEVGHYCSTQKSPTSGDYFPIFTKEMEKLQEVVTKQNWGTHSEGMSSTTPIYGLAQCFQDLSSIDCLQCFASSRTKLPRCLPSVSARIYLDGCFLRYDNYSFYTEDTDPLRDTVNCTSQYGAVVGDGEKLVFAESVAKVVESVVRVAVNEGRGIFAVGEGGGVYALAQCWKTVGVKGCSDCLRKAENEVKGCLPKREGRALNTGCYLRYSTVKFYNQGGEDGQGDDSSRKRAIVAAGSVLAAAVVVLTLAASYVAFTKKRKKNNFIEAPPSLKNSSLNYKYETLEKATDYFSSSRKIGQGGAGSVYKGTLPNGNDVAVKRLVFNNRQWVDDFFNEVNLISGMQHKNLVKLLGCSIEGPESLIVYEYLPNKSLDQFIFEKDITRILKWKQRFEIILGTAEGLAYLHGGSEIRIIHRDIKSSNVLLDENLNPKIADFGLARCFGTDKTHLSTGIAGTLGYMAPEYLIQGQLTDKADVYSFGVLVLEIASGRKNNVFREDSGSLLQTVWKLYQSNRLGEAVDPGLGEDFPAREASRVFQIGLLCTQASASLRPSMTQVVSILSNSNLDAPIPKQPPFLNSRLLDQASPLGFSIGSSSSNTFKKTGVSYSPSEFSSTCSLIGPTRNEETIMEA*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
