Report for Sequence Feature Glyma05g08060
Feature Type: gene_model
Chromosome: Gm05
Start: 7992847
stop: 7997074
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g08060
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G08510 AT
Annotation by Michelle Graham. TAIR10: fatty acyl-ACP thioesterases B | chr1:2691546-2693409 REVERSE LENGTH=412
SoyBase E_val: 0 ISS
GO:0006633 GO-bp
Annotation by Michelle Graham. GO Biological Process: fatty acid biosynthetic process
SoyBase N/A ISS
GO:0008152 GO-bp
Annotation by Michelle Graham. GO Biological Process: metabolic process
SoyBase N/A ISS
GO:0009507 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: chloroplast
SoyBase N/A ISS
GO:0009536 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: plastid
SoyBase N/A ISS
GO:0000036 GO-mf
Annotation by Michelle Graham. GO Molecular Function: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process
SoyBase N/A ISS
GO:0016297 GO-mf
Annotation by Michelle Graham. GO Molecular Function: acyl-[acyl-carrier-protein] hydrolase activity
SoyBase N/A ISS
GO:0016790 GO-mf
Annotation by Michelle Graham. GO Molecular Function: thiolester hydrolase activity
SoyBase N/A ISS
PF01643 PFAM
Acyl-ACP thioesterase
JGI ISS
PF12590 PFAM
Acyl-ATP thioesterase
JGI ISS
UniRef100_B1MVG6 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Acyl-ACP thioesterase n=1 Tax=Glycine max RepID=B1MVG6_SOYBN
SoyBase E_val: 0 ISS
UniRef100_I1K1B6 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1K1B6_SOYBN
SoyBase E_val: 0 ISS
Proteins Associated with Glyma05g08060
Locus Gene Symbol Protein Name
FATB1A 16:0-acyl carrier protein (ACP) thioesterase enzyme
Expression Patterns of Glyma05g08060
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma05g08060
Paralog Evidence Comments
Glyma17g12940 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g08060 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.05g012300 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma05g08060
Transcripts of Glyma05g08060
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g08060.3 sequence type=transcript gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GCTATTCATTCATTCATTCCTCTTTCTCTCTGATCGCAAACTGCACCTCTACGCTCCACTCTTCTCATTTTCTCTTCCTTTCTCGCTTCTCAGATCCAACTCCTCAGATAACACAAGACCAAACCCGCTTTTTCTGCATTTCTAGACTAGACGTTCTACCGGAGAAGCGACCTTAGAAATTCATTATGGTGGCAACAGCTGCTACTTCATCATTTTTCCCTGTTACTTCACCCTCGCCGGACTCTGGTGGAGCAGGCAGCAAACTTGGTGGTGGGCCTGCAAACCTTGGAGGACTAAAATCCAAATCTGCGTCTTCTGGTGGCTTGAAGGCAAAGGCGCAAGCCCCTTCGAAAATTAATGGAACCACAGTTGTTACATCTAAAGAAAGCTTCAAGCATGATGATGATCTACCTTCGCCTCCCCCCAGAACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCCGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGACATGCTTATTGACCCCTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGTGAAAACTTTTCTATTAGATCATATGAGATTGGTGCTGATCGTACCGCATCTATAGAAACAGTAATGAACCATTTGCAAGAAACTGCACTTAATCATGTTAAAAGTGCTGGGCTTCTTGGTGATGGCTTTGGTTCCACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTGGAACGCTATCCTACATGGGGTGACATAGTTCAAGTGGACACTTGGGTTTCTGGATCAGGGAAGAATGGTATGCGCCGTGATTGGCTTTTACGTGACTGCAAAACTGGTGAAATCTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAGCTAACACGGAGGCTGTCTAAAATTCCAGAAGAAGTCAGACAGGAGATAGGATCTTATTTTGTGGATTCTGATCCAATTCTGGAAGAGGATAACAGAAAACTGACTAAACTTGACGACAACACAGCGGATTATATTCGTACCGGTTTAAGTGTATGTCAACTAGTTTTTTTTCTAATTGCTGTCATTAATTTATTTTCTCAAATTATTTCAGATGTTGTTTTCTAATTAGTTTACATAATGCATCTTCATTTTGCAGCCTAGGTGGAGTGATCTAGATATCAATCAGCATGTCAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGCCAATCTTGGAGAGTCATGAGCTTTCTTCCATGACTTTAGAGTATAGGAGAGAGTGTGGTAGGGACAGTGTGCTGGATTCCCTGACTGCTGTATCTGGGGCCGACATGGGCAATCTAGCTCACAGCGGGCATGTTGAGTGCAAGCATTTGCTTCGACTGGAAAATGGTGCTGAGATTGTGAGGGGCAGGACTGAGTGGAGGCCCAAACCTGTGAACAACTTTGGTGTTGTGAACCAGGTTCCAGCAGAAAGCACCTAAGATTTTGAAATGGTTAACGATTGGAGTTGCATCAGTCTCCTTGCTATGTTTAGACTTATTCTGGTCCCTGGGGAGAGTTTTGCTTGTGTCTATCCAATCAATCTACATGTCTTTATATATATACACCTTCTAATTTGTGATACTTTGGTGGGTAAGGGGGAAAAGCAGCAGTAAATCTCATTCTCATTGTAATTAGCTACTGCTGTATTCTCTCTTTCTGCTGCTCCATATTTCATTTCATCTCTGATTGCGCTACTGCTAGGCTGTCTTCAATATTTAATTGCTTGTTCAAAATAGCTAGGCATGTATATTATTATTCTTTTTCTCTTGGCCCAATTAAAGATGCAATTTTCCTTGTGAACACAGCATAATTCTTATTCTTATTTATTTTTGTATATCCTGTATGCAAGAATGACTTGTCCTCCAATACAACTGTGATTTTGTATGCTCCAGCTTGTATTTTATGCCAGCTTCCCACATGGGAATTATTGTGC
>Glyma05g08060.4 sequence type=transcript gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
GAATGCTAATGCCTTATCCCTAACTCATAACACAATTACACTGTCTCTCTCTTTTCCAAAATTAGGGAAACAACAAGGACGCAAAATGACACAATAGCCCTTCTTCCCTGTTTCCAGCTTTTCTCCTTCTCTCTCTCCATCTTCTTCTTCTTCTTCACTCAGTCAGATCCAACTCCTCAGATAACACAAGACCAAACCCGCTTTTTCTGCATTTCTAGACTAGACGTTCTACCGGAGAAGCGACCTTAGAAATTCATTATGGTGGCAACAGCTGCTACTTCATCATTTTTCCCTGTTACTTCACCCTCGCCGGACTCTGGTGGAGCAGGCAGCAAACTTGGTGGTGGGCCTGCAAACCTTGGAGGACTAAAATCCAAATCTGCGTCTTCTGGTGGCTTGAAGGCAAAGGCGCAAGCCCCTTCGAAAATTAATGGAACCACAGTTGTTACATCTAAAGAAAGCTTCAAGCATGATGATGATCTACCTTCGCCTCCCCCCAGAACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCCGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGACATGCTTATTGACCCCTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGTGAAAACTTTTCTATTAGATCATATGAGATTGGTGCTGATCGTACCGCATCTATAGAAACAGTAATGAACCATTTGCAAGAAACTGCACTTAATCATGTTAAAAGTGCTGGGCTTCTTGGTGATGGCTTTGGTTCCACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTGGAACGCTATCCTACATGGGGTGACATAGTTCAAGTGGACACTTGGGTTTCTGGATCAGGGAAGAATGGTATGCGCCGTGATTGGCTTTTACGTGACTGCAAAACTGGTGAAATCTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAGCTAACACGGAGGCTGTCTAAAATTCCAGAAGAAGTCAGACAGGAGATAGGATCTTATTTTGTGGATTCTGATCCAATTCTGGAAGAGGATAACAGAAAACTGACTAAACTTGACGACAACACAGCGGATTATATTCGTACCGGTTTAAGTCCTAGGTGGAGTGATCTAGATATCAATCAGCATGTCAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGCCAATCTTGGAGAGTCATGAGCTTTCTTCCATGACTTTAGAGTATAGGAGAGAGTGTGGTAGGGACAGTGTGCTGGATTCCCTGACTGCTGTATCTGGGGCCGACATGGGCAATCTAGCTCACAGCGGGCATGTTGAGTGCAAGCATTTGCTTCGACTGGAAAATGGTGCTGAGATTGTGAGGGGCAGGACTGAGTGGAGGCCCAAACCTGTGAACAACTTTGGTGTTGTGAACCAGGTTCCAGCAGAAAGCACCTAAGATTTTGAAATGGTTAACGATTGGAGTTGCATCAGTCTCCTTGCTATGTTTAGACTTATTCTGGTCCCTGGGGAGAGTTTTGCTTGTGTCTATCCAATCAATCTACATGTCTTTATATATATACACCTTCTAATTTGTGATACTTTGGTGGGTAAGGGGGAAAAGCAGCAGTAAATCTCATTCTCATTGTAATTAGCTACTGCTGTATTCTCTCTTTCTGCTGCTCCATATTTCATTTCATCTCTGATTGCGCTACTGCTAGGCTGTCTTCAATATTTAATTGCTTGTTCAAAATAGCTAGGCATGTATATTATTATTCTTTTTCTCTTGGCCCAATTAAAGATGCAATTTTCCTTGTGAACACAGCATAATTCTTATTCTTATTTATTTTTGTATATCCTGTATGCAAGAATGACTTGTCCTCCAATACAACTGTGATTTTGTATGCTCCAGCTTGTATTTTATGCCAGCTTCCCACATGGGAATTATTGTGCAAA
Coding sequences of Glyma05g08060
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g08060.1 sequence type=CDS gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGCAACAGCTGCTACTTCATCATTTTTCCCTGTTACTTCACCCTCGCCGGACTCTGGTGGAGCAGGCAGCAAACTTGGTGGTGGGCCTGCAAACCTTGGAGGACTAAAATCCAAATCTGCGTCTTCTGGTGGCTTGAAGGCAAAGGCGCAAGCCCCTTCGAAAATTAATGGAACCACAGTTGTTACATCTAAAGAAAGCTTCAAGCATGATGATGATCTACCTTCGCCTCCCCCCAGAACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCCGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGACATGCTTATTGACCCCTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGTGAAAACTTTTCTATTAGATCATATGAGATTGGTGCTGATCGTACCGCATCTATAGAAACAGTAATGAACCATTTGCAAGAAACTGCACTTAATCATGTTAAAAGTGCTGGGCTTCTTGGTGATGGCTTTGGTTCCACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTGGAACGCTATCCTACATGGGGTGACATAGTTCAAGTGGACACTTGGGTTTCTGGATCAGGGAAGAATGGTATGCGCCGTGATTGGCTTTTACGTGACTGCAAAACTGGTGAAATCTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAGCTAACACGGAGGCTGTCTAAAATTCCAGAAGAAGTCAGACAGGAGATAGGATCTTATTTTGTGGATTCTGATCCAATTCTGGAAGAGGATAACAGAAAACTGACTAAACTTGACGACAACACAGCGGATTATATTCGTACCGGTTTAAGTCCTAGGTGGAGTGATCTAGATATCAATCAGCATGTCAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGCCAATCTTGGAGAGTCATGAGCTTTCTTCCATGACTTTAGAGTATAGGAGAGAGTGTGGTAGGGACAGTGTGCTGGATTCCCTGACTGCTGTATCTGGGGCCGACATGGGCAATCTAGCTCACAGCGGGCATGTTGAGTGCAAGCATTTGCTTCGACTGGAAAATGGTGCTGAGATTGTGAGGGGCAGGACTGAGTGGAGGCCCAAACCTGTGAACAACTTTGGTGTTGTGAACCAGGTTCCAGCAGAAAGCACCTAA
>Glyma05g08060.3 sequence type=CDS gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGCAACAGCTGCTACTTCATCATTTTTCCCTGTTACTTCACCCTCGCCGGACTCTGGTGGAGCAGGCAGCAAACTTGGTGGTGGGCCTGCAAACCTTGGAGGACTAAAATCCAAATCTGCGTCTTCTGGTGGCTTGAAGGCAAAGGCGCAAGCCCCTTCGAAAATTAATGGAACCACAGTTGTTACATCTAAAGAAAGCTTCAAGCATGATGATGATCTACCTTCGCCTCCCCCCAGAACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCCGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGACATGCTTATTGACCCCTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGTGAAAACTTTTCTATTAGATCATATGAGATTGGTGCTGATCGTACCGCATCTATAGAAACAGTAATGAACCATTTGCAAGAAACTGCACTTAATCATGTTAAAAGTGCTGGGCTTCTTGGTGATGGCTTTGGTTCCACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTGGAACGCTATCCTACATGGGGTGACATAGTTCAAGTGGACACTTGGGTTTCTGGATCAGGGAAGAATGGTATGCGCCGTGATTGGCTTTTACGTGACTGCAAAACTGGTGAAATCTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAGCTAACACGGAGGCTGTCTAAAATTCCAGAAGAAGTCAGACAGGAGATAGGATCTTATTTTGTGGATTCTGATCCAATTCTGGAAGAGGATAACAGAAAACTGACTAAACTTGACGACAACACAGCGGATTATATTCGTACCGGTTTAAGTGTATGTCAACTAGTTTTTTTTCTAATTGCTGTCATTAATTTATTTTCTCAAATTATTTCAGATGTTGTTTTCTAA
>Glyma05g08060.4 sequence type=CDS gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGTGGCAACAGCTGCTACTTCATCATTTTTCCCTGTTACTTCACCCTCGCCGGACTCTGGTGGAGCAGGCAGCAAACTTGGTGGTGGGCCTGCAAACCTTGGAGGACTAAAATCCAAATCTGCGTCTTCTGGTGGCTTGAAGGCAAAGGCGCAAGCCCCTTCGAAAATTAATGGAACCACAGTTGTTACATCTAAAGAAAGCTTCAAGCATGATGATGATCTACCTTCGCCTCCCCCCAGAACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTTGCTGCTATCACAACAATTTTCTTGGCCGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCACGGCGACCTGACATGCTTATTGACCCCTTTGGGATAGGAAAAATTGTTCAGGATGGTCTTGTGTTCCGTGAAAACTTTTCTATTAGATCATATGAGATTGGTGCTGATCGTACCGCATCTATAGAAACAGTAATGAACCATTTGCAAGAAACTGCACTTAATCATGTTAAAAGTGCTGGGCTTCTTGGTGATGGCTTTGGTTCCACGCCAGAAATGTGCAAAAAGAACTTGATATGGGTGGTTACTCGGATGCAGGTTGTGGTGGAACGCTATCCTACATGGGGTGACATAGTTCAAGTGGACACTTGGGTTTCTGGATCAGGGAAGAATGGTATGCGCCGTGATTGGCTTTTACGTGACTGCAAAACTGGTGAAATCTTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAGCTAACACGGAGGCTGTCTAAAATTCCAGAAGAAGTCAGACAGGAGATAGGATCTTATTTTGTGGATTCTGATCCAATTCTGGAAGAGGATAACAGAAAACTGACTAAACTTGACGACAACACAGCGGATTATATTCGTACCGGTTTAAGTCCTAGGTGGAGTGATCTAGATATCAATCAGCATGTCAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGCCAATCTTGGAGAGTCATGAGCTTTCTTCCATGACTTTAGAGTATAGGAGAGAGTGTGGTAGGGACAGTGTGCTGGATTCCCTGACTGCTGTATCTGGGGCCGACATGGGCAATCTAGCTCACAGCGGGCATGTTGAGTGCAAGCATTTGCTTCGACTGGAAAATGGTGCTGAGATTGTGAGGGGCAGGACTGAGTGGAGGCCCAAACCTGTGAACAACTTTGGTGTTGTGAACCAGGTTCCAGCAGAAAGCACCTAA
Predicted protein sequences of Glyma05g08060
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g08060.1 sequence type=predicted peptide gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVATAATSSFFPVTSPSPDSGGAGSKLGGGPANLGGLKSKSASSGGLKAKAQAPSKINGTTVVTSKESFKHDDDLPSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETVMNHLQETALNHVKSAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVERYPTWGDIVQVDTWVSGSGKNGMRRDWLLRDCKTGEILTRASSVWVMMNKLTRRLSKIPEEVRQEIGSYFVDSDPILEEDNRKLTKLDDNTADYIRTGLSPRWSDLDINQHVNNVKYIGWILESAPQPILESHELSSMTLEYRRECGRDSVLDSLTAVSGADMGNLAHSGHVECKHLLRLENGAEIVRGRTEWRPKPVNNFGVVNQVPAEST*
>Glyma05g08060.3 sequence type=predicted peptide gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVATAATSSFFPVTSPSPDSGGAGSKLGGGPANLGGLKSKSASSGGLKAKAQAPSKINGTTVVTSKESFKHDDDLPSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETVMNHLQETALNHVKSAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVERYPTWGDIVQVDTWVSGSGKNGMRRDWLLRDCKTGEILTRASSVWVMMNKLTRRLSKIPEEVRQEIGSYFVDSDPILEEDNRKLTKLDDNTADYIRTGLSVCQLVFFLIAVINLFSQIISDVVF*
>Glyma05g08060.4 sequence type=predicted peptide gene model=Glyma05g08060 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MVATAATSSFFPVTSPSPDSGGAGSKLGGGPANLGGLKSKSASSGGLKAKAQAPSKINGTTVVTSKESFKHDDDLPSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETVMNHLQETALNHVKSAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVERYPTWGDIVQVDTWVSGSGKNGMRRDWLLRDCKTGEILTRASSVWVMMNKLTRRLSKIPEEVRQEIGSYFVDSDPILEEDNRKLTKLDDNTADYIRTGLSPRWSDLDINQHVNNVKYIGWILESAPQPILESHELSSMTLEYRRECGRDSVLDSLTAVSGADMGNLAHSGHVECKHLLRLENGAEIVRGRTEWRPKPVNNFGVVNQVPAEST*