Report for Sequence Feature Glyma05g07431
Feature Type: gene_model
Chromosome: Gm05
Start: 7502331
stop: 7503273
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma05g07431
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G60880 AT
Annotation by Michelle Graham. TAIR10: breaking of asymmetry in the stomatal lineage | chr5:24488553-24489703 REVERSE LENGTH=262
SoyBase E_val: 3.00E-15 ISS
GO:0009786 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of asymmetric cell division
SoyBase N/A ISS
GO:0009826 GO-bp
Annotation by Michelle Graham. GO Biological Process: unidimensional cell growth
SoyBase N/A ISS
GO:0010374 GO-bp
Annotation by Michelle Graham. GO Biological Process: stomatal complex development
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0019897 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extrinsic to plasma membrane
SoyBase N/A ISS
UniRef100_B9RLI7 UniRef
Annotation by Michelle Graham. Best UniRef hit: Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9RLI7_RICCO
SoyBase E_val: 8.00E-19 ISS
UniRef100_Q5BPF3 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Breaking of asymmetry in the stomatal lineage protein n=1 Tax=Arabidopsis thaliana RepID=Q5BPF3_ARATH
SoyBase E_val: 2.00E-12 ISS
Expression Patterns of Glyma05g07431
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma05g07431
Paralog Evidence Comments
Glyma17g08921 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma05g07431 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
References for Glyma05g07431
Coding sequences of Glyma05g07431
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma05g07431.1 sequence type=CDS gene model=Glyma05g07431 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAAAACATGGCATTTGATAGGAAAAACGAAAAAAGCTTTGATAGTATCAGTAACAACAATTTGTCACGGCCAAGCAAAAAATTCCACAGCAAGAAGAGACATTCAAACAATCCAATAATAAAGGATAAAGATGGTGGTGGGGTTCCCATTGGAAACAAGTTTGATTATTCAAGTTGGTCACTCTCCGCGGATGAAGATTACATAGTGTTTTGCTTTGGAAAGGATGTGGCAAAAGGTGACAAAGGTGTCAATGAAGTGCATAAAAATTCAAGGCCGGTGAATTGCAAGCTGAAATATGGTGAGAATGAAGAACAAGTTAGTGACCTGAACATTCATGAGAAAATATCAAATGCTAATCAGCACCATGATGATGACATAAGAAGAGCAGAATCAAGTAACTCTGACCAATCTGAAGGCAGTAGAAGTTCTTTTGCGTTCCCCGTGTTAGGTTGGGAATGGATTGGAAGCCCTGTACAAATGCCCAAGTCAGAAGGTTTGCACTTAAGGAAGAACAAGGCTCGAGCTATGCGATTTCAGTGTTGTAGATTCTGA
Predicted protein sequences of Glyma05g07431
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma05g07431.1 sequence type=predicted peptide gene model=Glyma05g07431 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKNMAFDRKNEKSFDSISNNNLSRPSKKFHSKKRHSNNPIIKDKDGGGVPIGNKFDYSSWSLSADEDYIVFCFGKDVAKGDKGVNEVHKNSRPVNCKLKYGENEEQVSDLNIHEKISNANQHHDDDIRRAESSNSDQSEGSRSSFAFPVLGWEWIGSPVQMPKSEGLHLRKNKARAMRFQCCRF*