Report for Sequence Feature Glyma04g39160
Feature Type: gene_model
Chromosome: Gm04
Start: 45402243
stop: 45405522
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g39160
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT1G48910 AT
Annotation by Michelle Graham. TAIR10: Flavin-containing monooxygenase family protein | chr1:18091681-18093774 FORWARD LENGTH=383
SoyBase E_val: 6.00E-157 ISS
GO:0022603 GO-bp
Annotation by Michelle Graham. GO Biological Process: regulation of anatomical structure morphogenesis
SoyBase N/A ISS
GO:0042744 GO-bp
Annotation by Michelle Graham. GO Biological Process: hydrogen peroxide catabolic process
SoyBase N/A ISS
GO:0055114 GO-bp
Annotation by Michelle Graham. GO Biological Process: oxidation-reduction process
SoyBase N/A ISS
GO:0005575 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cellular component
SoyBase N/A ISS
GO:0004497 GO-mf
Annotation by Michelle Graham. GO Molecular Function: monooxygenase activity
SoyBase N/A ISS
GO:0004499 GO-mf
Annotation by Michelle Graham. GO Molecular Function: N,N-dimethylaniline monooxygenase activity
SoyBase N/A ISS
GO:0016491 GO-mf
Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity
SoyBase N/A ISS
GO:0050660 GO-mf
Annotation by Michelle Graham. GO Molecular Function: flavin adenine dinucleotide binding
SoyBase N/A ISS
GO:0050661 GO-mf
Annotation by Michelle Graham. GO Molecular Function: NADP binding
SoyBase N/A ISS
KOG1399
KOG
Flavin-containing monooxygenase
JGI ISS
PTHR23023 Panther
DIMETHYLANILINE MONOOXYGENASE
JGI ISS
PTHR23023:SF5 Panther
MONOOXYGENASE
JGI ISS
PF00743 PFAM
Flavin-binding monooxygenase-like
JGI ISS
UniRef100_G7JYZ1 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Dimethylaniline monooxygenase n=1 Tax=Medicago truncatula RepID=G7JYZ1_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1JY26 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JY26_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g39160
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Paralogs of Glyma04g39160
Paralog Evidence Comments
Glyma06g15810 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma04g39160 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g213600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g39160
Coding sequences of Glyma04g39160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g39160.1 sequence type=CDS gene model=Glyma04g39160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGAAGTATCAGTGATAATCGTAGGTGCAGGTCCTTCTGGACTTGCAATTTCTGCATGCCTATCACAAAACTTTATCTCTCACATAATACTCGAGAAAGAGGATTGCAGTGCCTCTCTTTGGAGGAAAAACGCTTATGATAGATTAAAGCTCCATCTTGCTAGCGAGTTTTGTGTTTTGCCTCTCATGCCTCACCCACCCTCAGCCCCAACTTACCTATCCAAAGATGAATTTGTTCAATACATTGACTCGTACATTGCATGTTTCAACATAAACCCTCTCTATTGTCGTATGGTTGAGTTTGCTGCGTATGATGAAGTTGAAAACAAGTGGAGGGTCGAAGCGAAGAAGACTCTTGAGGGCACAAGTGAAACTTATGTGGCTAAGTTTCTTGTGATTGCCACGGGTGAAAATAGTGAAGGGTATATTCCTGATGTGCCTGGACTAGAAAGCTTTGAAGGAGAGATAGTGCACTCCAAATACTACAAATCGGGTTCAAAATATGAAACCAAAGAAGTTTTGGTAGTTGGGTGTGGTAACTCTGGGATGGAGATTGCTTATGATCTCAATGACTGGGGTGCAAACACTTCTATTCTCATCCGAAATCCGGTTCATGTCTTCACCAAAGAATTGATCAATGAAGGCATGCGAATGCTGAAGCATTTACCCGTTCATGTTGTGGACAATATCATTACCTCTTTGGCAAACATGGAATATGGTGATCTATCTAAGTACGGAATTTATCAGCCCAAAAAAGGACCCTTTCATCTTAAGTTTATAACTGGAAGGGCTCCAGTTATCGATGTTGGAACCATTGAAAAGATTAAGGAGGGAGCAATTAAGGTAATTCCTTCTCATATAGTGAGAATTGAAAACAAGAAGGTCATATTTGAAAACGATGCTGAAAAGGAGTTTGATGTAATCGTGTTTGCTACTGGCTACAGAAGTGTAGCTAATAAGTGGCTTAAGGATTACAAATATGTTCTAAATGATGAGGGGATGCCGAACAATGATTTTCCAAACCATTGGAAGGGTGATCGTGGATTATATTGTGCAGGACTATCAAACAGAGGCTTATTTGGAGTCAAAATGGATGTTGAGGCTATTGCTGATGACATCAACCAAACTCTCAAGTTACATTAA
Predicted protein sequences of Glyma04g39160
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g39160.1 sequence type=predicted peptide gene model=Glyma04g39160 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEEVSVIIVGAGPSGLAISACLSQNFISHIILEKEDCSASLWRKNAYDRLKLHLASEFCVLPLMPHPPSAPTYLSKDEFVQYIDSYIACFNINPLYCRMVEFAAYDEVENKWRVEAKKTLEGTSETYVAKFLVIATGENSEGYIPDVPGLESFEGEIVHSKYYKSGSKYETKEVLVVGCGNSGMEIAYDLNDWGANTSILIRNPVHVFTKELINEGMRMLKHLPVHVVDNIITSLANMEYGDLSKYGIYQPKKGPFHLKFITGRAPVIDVGTIEKIKEGAIKVIPSHIVRIENKKVIFENDAEKEFDVIVFATGYRSVANKWLKDYKYVLNDEGMPNNDFPNHWKGDRGLYCAGLSNRGLFGVKMDVEAIADDINQTLKLH*