Glyma04g38300 - SoyBase

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Report for Sequence Feature Glyma04g38300

Feature Type:	gene_model
Chromosome:	Gm04
Start:	44698379
stop:	44700182
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g38300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
UniRef100_B9RHN5	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Hepatocyte growth factor-regulated tyrosine kinase substrate, putative n=1 Tax=Ricinus communis RepID=B9RHN5_RICCO	SoyBase	E_val: 2.00E-26	ISS
UniRef100_UPI000233A471	UniRef	Annotation by Michelle Graham. Best UniRef hit: UPI000233A471 related cluster n=1 Tax=unknown RepID=UPI000233A471	SoyBase	E_val: 8.00E-27	ISS

Expression Patterns of Glyma04g38300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g38300 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments

References for Glyma04g38300

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Coding sequences of Glyma04g38300

Limit To All Plant Sequences

>Glyma04g38300.1   sequence type=CDS   gene model=Glyma04g38300   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATAGATGAAAGGATAATTTCTCCAGCAATTGAATTGAATGAGCAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGCTACAATGACCACCACTCGATTTGACCATGAAGAAGCAGAGGAGGAAGAGGAGCCTGAACAGTTGAATGGGGAGGTTCCTCATCCAGTGGCAATTCCACCCCCACCTGCAAAGCACATTGAGAGGGAGAGGTTTCTTCAGGAAAATAAGGATGGTTCTAATTTGTCTGGCCACATGAGAGGTATCTCCTTACATAGTCGTAACGGCAGCAGCTCTTGCAGTGGAAGCTTTGATTTTAGTGACTTATCTCTTGATAACAGGATCTCTTTTAGCTTTTCTTTTTCATTTTTTGTCTAA

Predicted protein sequences of Glyma04g38300

Limit To All Plant Sequences

>Glyma04g38300.1   sequence type=predicted peptide   gene model=Glyma04g38300   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
IDERIISPAIELNEQLQKVLARHDDLLAGRATMTTTRFDHEEAEEEEEPEQLNGEVPHPVAIPPPPAKHIERERFLQENKDGSNLSGHMRGISLHSRNGSSSCSGSFDFSDLSLDNRISFSFSFSFFV*

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