Report for Sequence Feature Glyma04g37660
Feature Type: gene_model
Chromosome: Gm04
Start: 44030805
stop: 44032765
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g37660
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G45910 AT
Annotation by Michelle Graham. TAIR10: GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372
SoyBase E_val: 4.00E-103 ISS
GO:0006629 GO-bp
Annotation by Michelle Graham. GO Biological Process: lipid metabolic process
SoyBase N/A ISS
GO:0005576 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular region
SoyBase N/A ISS
GO:0016788 GO-mf
Annotation by Michelle Graham. GO Molecular Function: hydrolase activity, acting on ester bonds
SoyBase N/A ISS
PTHR22835 Panther
ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN
JGI ISS
PTHR22835:SF39 Panther
LATERAL SIGNALING TARGET PROTEIN 2
JGI ISS
PF00657 PFAM
GDSL-like Lipase/Acylhydrolase
JGI ISS
UniRef100_G7JAK8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: GDSL esterase/lipase n=1 Tax=Medicago truncatula RepID=G7JAK8_MEDTR
SoyBase E_val: 6.00E-171 ISS
UniRef100_I1JXP1 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JXP1_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g37660
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g37660 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g199600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g37660
Coding sequences of Glyma04g37660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g37660.1 sequence type=CDS gene model=Glyma04g37660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGAAGATCTCCATTCTCTTTATCACAATCTTTTCTTGTGGTTTTCTTGGAAATGTTGTTTCAAATGCTAGTCCTCTTCCATATGAAGCTATTTTTAACTTTGGTGACTCTATAAGTGATACTGGAAATGCTGCTCATAACCACCCACCTATGCCTGGCAATAGTCCTTATGGTTCAACATACTTTAAACATCCTTCTGGACGTATGTCAAATGGACGACTAATCATAGATTTTATAGCCGAGGCATATGGGATGCCAATGTTGCCAGCCTATTTGAATCTCACCAAAGGACAAGACATTAAGAAAGGAGTGAATTTTGCATACGCTGGTTCAACTGCACTTGATAAGGATTTTTTAGTACAAAAAAGAATCAATATAGAGGAAGCTACTTTTTCATTGAGTGCTCAATTTGATTGGTTTAAAGGACTCAAATCCTCCCTTTGTACAAGCAAAGAAGAGTGCGATAATTACTTCAAAAACTCATTGTTTCTAGTAGGAGAGATTGGTGGGAATGACATCAATGCACTCATCCCATATAAAAATATTACAGAACTTCGAGAAATGGTTCCATCAATTGTTGAAACAATTGCCAATACCACCTCTAAATTAATAGAAGAAGGAGCGGTAGAACTAGTGGTACCAGGGAACTTCCCAATTGGGTGTAATTCTGCTGTTTTGGCAATAGTGAATAGCGAAAAGAAAGAAGACTATGATCAATTTGGGTGTTTGATAGCTTACAATACTTTCATTGAGTACTACAATGAGCAACTCAAAAAGGCTATAGAGACATTAAGAAAAAACAACGCACATGTTAAGATAACATATTTTGATTACTATGGTGCTACCAAACGTTTATTTCAAGCACCACAACAATATGGCTTTTCTTCCGGTAAGACTGAAACTTTCAGAGCATGTTGTGGAAAGGGTGAACCTTACAATCTCAGTTTTCAAATATTATGTGGTAGTCCTGCTGCAATAGTTTGCTCAGATCCTTCAAAACAAATAAATTGGGATGGGCCTCATTTTACTGAAGCAGCGTATAGGCTAATAGCTAAGGGACTAGTTGAGGGCCCTTTCGCTAATCCATCTCTCAAATCCCCTCCTTTCAAGATAGCTTAG
Predicted protein sequences of Glyma04g37660
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g37660.1 sequence type=predicted peptide gene model=Glyma04g37660 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MKISILFITIFSCGFLGNVVSNASPLPYEAIFNFGDSISDTGNAAHNHPPMPGNSPYGSTYFKHPSGRMSNGRLIIDFIAEAYGMPMLPAYLNLTKGQDIKKGVNFAYAGSTALDKDFLVQKRINIEEATFSLSAQFDWFKGLKSSLCTSKEECDNYFKNSLFLVGEIGGNDINALIPYKNITELREMVPSIVETIANTTSKLIEEGAVELVVPGNFPIGCNSAVLAIVNSEKKEDYDQFGCLIAYNTFIEYYNEQLKKAIETLRKNNAHVKITYFDYYGATKRLFQAPQQYGFSSGKTETFRACCGKGEPYNLSFQILCGSPAAIVCSDPSKQINWDGPHFTEAAYRLIAKGLVEGPFANPSLKSPPFKIA*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
