Glyma04g36200 - SoyBase

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Report for Sequence Feature Glyma04g36200

Feature Type:	gene_model
Chromosome:	Gm04
Start:	42731238
stop:	42734117
Source:	JGI
Version:	Wm82.a1.v1.1
High confidence:	yes

A newer version of this gene model can be found here:

Annotations for Glyma04g36200

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G30140	AT	Annotation by Michelle Graham. TAIR10: UDP-Glycosyltransferase superfamily protein \| chr2:12872200-12873691 FORWARD LENGTH=455	SoyBase	E_val: 6.00E-114	ISS
GO:0009407	GO-bp	Annotation by Michelle Graham. GO Biological Process: toxin catabolic process	SoyBase	N/A	ISS
GO:0009627	GO-bp	Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance	SoyBase	N/A	ISS
GO:0009909	GO-bp	Annotation by Michelle Graham. GO Biological Process: regulation of flower development	SoyBase	N/A	ISS
GO:0010583	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to cyclopentenone	SoyBase	N/A	ISS
GO:0034976	GO-bp	Annotation by Michelle Graham. GO Biological Process: response to endoplasmic reticulum stress	SoyBase	N/A	ISS
GO:0005634	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: nucleus	SoyBase	N/A	ISS
GO:0005737	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm	SoyBase	N/A	ISS
GO:0005829	GO-cc	Annotation by Michelle Graham. GO Cellular Compartment: cytosol	SoyBase	N/A	ISS
GO:0008194	GO-mf	Annotation by Michelle Graham. GO Molecular Function: UDP-glycosyltransferase activity	SoyBase	N/A	ISS
GO:0016757	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring glycosyl groups	SoyBase	N/A	ISS
GO:0016758	GO-mf	Annotation by Michelle Graham. GO Molecular Function: transferase activity, transferring hexosyl groups	SoyBase	N/A	ISS
KOG1192	KOG	UDP-glucuronosyl and UDP-glucosyl transferase	JGI		ISS
PTHR11926	Panther	GLUCOSYL/GLUCURONOSYL TRANSFERASES	JGI		ISS
PTHR11926:SF15	Panther	UDP-GLUCURONOSYLTRANSFERASE RELATED	JGI		ISS
PF00201	PFAM	UDP-glucoronosyl and UDP-glucosyl transferase	JGI		ISS
UniRef100_G7KED3	UniRef	Annotation by Michelle Graham. Most informative UniRef hit: Indole-3-acetate beta-glucosyltransferase n=1 Tax=Medicago truncatula RepID=G7KED3_MEDTR	SoyBase	E_val: 3.00E-178	ISS
UniRef100_I1JXB7	UniRef	Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=2 Tax=Glycine max RepID=I1JXB7_SOYBN	SoyBase	E_val: 0	ISS

Expression Patterns of Glyma04g36200

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g36200 Gene Call Version Wm82.a1.v1.1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma.04g188100	Wm82.a2.v1	IGC	As supplied by JGI

References for Glyma04g36200

Schmutz et al. 2010
Genome sequence of the palaeopolyploid soybean
Nature 2010, 463:178-183

Transcripts of Glyma04g36200

Limit To All Plant Sequences

>Glyma04g36200.2   sequence type=transcript   gene model=Glyma04g36200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAATTCCAGAATCTCTTAGATTCAATGGACACGTGGTGGCCATGCCATTCCCAAGTCGAGGACACGTGAACTGCATGATGAACCTCTGCAAACTACTCGCGGCAGCATCTTCATCTTCTCCCTTCATCATCACCATTCTTGTCACCGAAGAGTGGCTCGGCTTCATCGGCTCCGAGCCGAAGCCGAGCAACGTTCGCTTCGCCACCATCCCCAACATAGCCTCCGATATCCCCGCTTTCTTCAAAGCCGTCGTCACCAACATGGAACCTCCCTTCGACCACCTCCTCCGCCGCCTTCACCCTCCCGTCACCGCCCTCGTCGCCGACGTCGAGCTTCACTTCCCTGTCGCCGTCGCCCGCCGCAGTAATATTCCGGTCGCGCTGCTTTGGACCATGTCGGCTTCCTTTTACCTCACGTTGCATCAACTAGGAAGCTTGGTTCGTAACCACTCTTTGAAGGTTGATGTTTTAGATGATTATGAAGAGCATATACCAGGAATTTCTGCAGCACAATTAGCTGATCTTCGAACGGTGCTTCGTGAAAATGACTTGAGGTTTTTGCAGCTTGAGTTGGAATGCATTTCAGTAGTGCCAAAAGCAGATTGTCTTATAGTTAATACTGTTCAAGAGTTGGAAGCTGAAGTAATTGATTCTTTGAGAGCCATGTTCCACTTTCCAATTTGTCGCATTGCCTTTCCTTACTTCAAACACGAAACATGTCATTTTGTGACCAACGACAGTGATTACAACGTTGACTACTTAAATTGGCTAGATCATCAGCCATCCATGTCTGTATTGTACATTTCTCTCGGTAGTTTCCTTTCTGTGTCATGTGCCCAAATGAATGAAATTGTTTCAGCTTTGAACACGAGTGGTGTTTGTTACTTGTGGGTGGTTCGTGGAGAAGTTTCATGGTTAAAAGAGAAATGTGGGGATAGGGGTTTAGTGGTGCCTTGGTGCGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGGTTTTGGAGCCACTGTGGGTGGAATTCAACTCTAGAAGCTGTTTTTGGTGGTATTCCAATGCTGACATTCCCTCTTTTCTTAGACCAAGTTCCAAATAGTAGGCAAATTTTGGAAGAGTGGAAGAATGGGTGGGAGCTTAAAAGATCAGATTTGGGAAGTGCAGAATTGATAACAAAAGATGAAATAGTGCAAGTGATTAGAGAGTTTATGGATCTTGGAAAGCGAAAAGAAATTCGAGACAGGGCACTAGAATTTAAGGGCATTTGTGACCGAGCAGTTGCAGAAGGTGGATCCTCCAATGTGAACCTTGATGCATTTATAAAAGATGTTTTGTGTGTTCAAAGGTCATTGAGAGGCAGGGGATATGTGATGTACAAAATAGGCAAATAA

Coding sequences of Glyma04g36200

Limit To All Plant Sequences

>Glyma04g36200.1   sequence type=CDS   gene model=Glyma04g36200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAACCTCCCTTCGACCACCTCCTCCGCCGCCTTCACCCTCCCGTCACCGCCCTCGTCGCCGACGTCGAGCTTCACTTCCCTGTCGCCGTCGCCCGCCGCAGTAATATTCCGGTCGCGCTGCTTTGGACCATGTCGGCTTCCTTTTACCTCACGTTGCATCAACTAGGAAGCTTGGTTCGTAACCACTCTTTGAAGGTTGATGTTTTAGATGATTATGAAGAGCATATACCAGGAATTTCTGCAGCACAATTAGCTGATCTTCGAACGGTGCTTCGTGAAAATGACTTGAGGTTTTTGCAGCTTGAGTTGGAATGCATTTCAGTAGTGCCAAAAGCAGATTGTCTTATAGTTAATACTGTTCAAGAGTTGGAAGCTGAAGTAATTGATTCTTTGAGAGCCATGTTCCACTTTCCAATTTGTCGCATTGCCTTTCCTTACTTCAAACACGAAACATGTCATTTTGTGACCAACGACAGTGATTACAACGTTGACTACTTAAATTGGCTAGATCATCAGCCATCCATGTCTGTATTGTACATTTCTCTCGGTAGTTTCCTTTCTGTGTCATGTGCCCAAATGAATGAAATTGTTTCAGCTTTGAACACGAGTGGTGTTTGTTACTTGTGGGTGGTTCGTGGAGAAGTTTCATGGTTAAAAGAGAAATGTGGGGATAGGGGTTTAGTGGTGCCTTGGTGCGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGGTTTTGGAGCCACTGTGGGTGGAATTCAACTCTAGAAGCTGTTTTTGGTGGTATTCCAATGCTGACATTCCCTCTTTTCTTAGACCAAGTTCCAAATAGTAGGCAAATTTTGGAAGAGTGGAAGAATGGGTGGGAGCTTAAAAGATCAGATTTGGGAAGTGCAGAATTGATAACAAAAGATGAAATAGTGCAAGTGATTAGAGAGTTTATGGATCTTGGAAAGCGAAAAGAAATTCGAGACAGGGCACTAGAATTTAAGGGCATTTGTGACCGAGCAGTTGCAGAAGGTGGATCCTCCAATGTGAACCTTGATGCATTTATAAAAGATGTTTTGTGTGTTCAAAGGTCATTGAGAGGCAGGGGATATGTGATGTACAAAATAGGCAAATAA

>Glyma04g36200.2   sequence type=CDS   gene model=Glyma04g36200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGAAATTCCAGAATCTCTTAGATTCAATGGACACGTGGTGGCCATGCCATTCCCAAGTCGAGGACACGTGAACTGCATGATGAACCTCTGCAAACTACTCGCGGCAGCATCTTCATCTTCTCCCTTCATCATCACCATTCTTGTCACCGAAGAGTGGCTCGGCTTCATCGGCTCCGAGCCGAAGCCGAGCAACGTTCGCTTCGCCACCATCCCCAACATAGCCTCCGATATCCCCGCTTTCTTCAAAGCCGTCGTCACCAACATGGAACCTCCCTTCGACCACCTCCTCCGCCGCCTTCACCCTCCCGTCACCGCCCTCGTCGCCGACGTCGAGCTTCACTTCCCTGTCGCCGTCGCCCGCCGCAGTAATATTCCGGTCGCGCTGCTTTGGACCATGTCGGCTTCCTTTTACCTCACGTTGCATCAACTAGGAAGCTTGGTTCGTAACCACTCTTTGAAGGTTGATGTTTTAGATGATTATGAAGAGCATATACCAGGAATTTCTGCAGCACAATTAGCTGATCTTCGAACGGTGCTTCGTGAAAATGACTTGAGGTTTTTGCAGCTTGAGTTGGAATGCATTTCAGTAGTGCCAAAAGCAGATTGTCTTATAGTTAATACTGTTCAAGAGTTGGAAGCTGAAGTAATTGATTCTTTGAGAGCCATGTTCCACTTTCCAATTTGTCGCATTGCCTTTCCTTACTTCAAACACGAAACATGTCATTTTGTGACCAACGACAGTGATTACAACGTTGACTACTTAAATTGGCTAGATCATCAGCCATCCATGTCTGTATTGTACATTTCTCTCGGTAGTTTCCTTTCTGTGTCATGTGCCCAAATGAATGAAATTGTTTCAGCTTTGAACACGAGTGGTGTTTGTTACTTGTGGGTGGTTCGTGGAGAAGTTTCATGGTTAAAAGAGAAATGTGGGGATAGGGGTTTAGTGGTGCCTTGGTGCGACCAATTGAAGGTTTTGTCACATCCTTCTGTAGGTGGGTTTTGGAGCCACTGTGGGTGGAATTCAACTCTAGAAGCTGTTTTTGGTGGTATTCCAATGCTGACATTCCCTCTTTTCTTAGACCAAGTTCCAAATAGTAGGCAAATTTTGGAAGAGTGGAAGAATGGGTGGGAGCTTAAAAGATCAGATTTGGGAAGTGCAGAATTGATAACAAAAGATGAAATAGTGCAAGTGATTAGAGAGTTTATGGATCTTGGAAAGCGAAAAGAAATTCGAGACAGGGCACTAGAATTTAAGGGCATTTGTGACCGAGCAGTTGCAGAAGGTGGATCCTCCAATGTGAACCTTGATGCATTTATAAAAGATGTTTTGTGTGTTCAAAGGTCATTGAGAGGCAGGGGATATGTGATGTACAAAATAGGCAAATAA

Predicted protein sequences of Glyma04g36200

Limit To All Plant Sequences

>Glyma04g36200.1   sequence type=predicted peptide   gene model=Glyma04g36200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEPPFDHLLRRLHPPVTALVADVELHFPVAVARRSNIPVALLWTMSASFYLTLHQLGSLVRNHSLKVDVLDDYEEHIPGISAAQLADLRTVLRENDLRFLQLELECISVVPKADCLIVNTVQELEAEVIDSLRAMFHFPICRIAFPYFKHETCHFVTNDSDYNVDYLNWLDHQPSMSVLYISLGSFLSVSCAQMNEIVSALNTSGVCYLWVVRGEVSWLKEKCGDRGLVVPWCDQLKVLSHPSVGGFWSHCGWNSTLEAVFGGIPMLTFPLFLDQVPNSRQILEEWKNGWELKRSDLGSAELITKDEIVQVIREFMDLGKRKEIRDRALEFKGICDRAVAEGGSSNVNLDAFIKDVLCVQRSLRGRGYVMYKIGK*

>Glyma04g36200.2   sequence type=predicted peptide   gene model=Glyma04g36200   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MEIPESLRFNGHVVAMPFPSRGHVNCMMNLCKLLAAASSSSPFIITILVTEEWLGFIGSEPKPSNVRFATIPNIASDIPAFFKAVVTNMEPPFDHLLRRLHPPVTALVADVELHFPVAVARRSNIPVALLWTMSASFYLTLHQLGSLVRNHSLKVDVLDDYEEHIPGISAAQLADLRTVLRENDLRFLQLELECISVVPKADCLIVNTVQELEAEVIDSLRAMFHFPICRIAFPYFKHETCHFVTNDSDYNVDYLNWLDHQPSMSVLYISLGSFLSVSCAQMNEIVSALNTSGVCYLWVVRGEVSWLKEKCGDRGLVVPWCDQLKVLSHPSVGGFWSHCGWNSTLEAVFGGIPMLTFPLFLDQVPNSRQILEEWKNGWELKRSDLGSAELITKDEIVQVIREFMDLGKRKEIRDRALEFKGICDRAVAEGGSSNVNLDAFIKDVLCVQRSLRGRGYVMYKIGK*

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