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Report for Sequence Feature Glyma04g34195

Feature Type:gene_model
Chromosome:Gm04
Start:40241267
stop:40243002
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G36530AT Annotation by Michelle Graham. TAIR10: Enolase | chr2:15321081-15323786 REVERSE LENGTH=444 SoyBaseE_val: 1.00E-60ISS
GO:0006094GO-bp Annotation by Michelle Graham. GO Biological Process: gluconeogenesis SoyBaseN/AISS
GO:0006096GO-bp Annotation by Michelle Graham. GO Biological Process: glycolysis SoyBaseN/AISS
GO:0006098GO-bp Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt SoyBaseN/AISS
GO:0009409GO-bp Annotation by Michelle Graham. GO Biological Process: response to cold SoyBaseN/AISS
GO:0009416GO-bp Annotation by Michelle Graham. GO Biological Process: response to light stimulus SoyBaseN/AISS
GO:0009651GO-bp Annotation by Michelle Graham. GO Biological Process: response to salt stress SoyBaseN/AISS
GO:0009737GO-bp Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus SoyBaseN/AISS
GO:0009853GO-bp Annotation by Michelle Graham. GO Biological Process: photorespiration SoyBaseN/AISS
GO:0046686GO-bp Annotation by Michelle Graham. GO Biological Process: response to cadmium ion SoyBaseN/AISS
GO:0000015GO-cc Annotation by Michelle Graham. GO Cellular Compartment: phosphopyruvate hydratase complex SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0005737GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm SoyBaseN/AISS
GO:0005739GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion SoyBaseN/AISS
GO:0005740GO-cc Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial envelope SoyBaseN/AISS
GO:0005829GO-cc Annotation by Michelle Graham. GO Cellular Compartment: cytosol SoyBaseN/AISS
GO:0005886GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane SoyBaseN/AISS
GO:0009506GO-cc Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma SoyBaseN/AISS
GO:0009507GO-cc Annotation by Michelle Graham. GO Cellular Compartment: chloroplast SoyBaseN/AISS
GO:0016020GO-cc Annotation by Michelle Graham. GO Cellular Compartment: membrane SoyBaseN/AISS
GO:0048046GO-cc Annotation by Michelle Graham. GO Cellular Compartment: apoplast SoyBaseN/AISS
GO:0000287GO-mf Annotation by Michelle Graham. GO Molecular Function: magnesium ion binding SoyBaseN/AISS
GO:0003677GO-mf Annotation by Michelle Graham. GO Molecular Function: DNA binding SoyBaseN/AISS
GO:0004634GO-mf Annotation by Michelle Graham. GO Molecular Function: phosphopyruvate hydratase activity SoyBaseN/AISS
GO:0005507GO-mf Annotation by Michelle Graham. GO Molecular Function: copper ion binding SoyBaseN/AISS
PTHR11902Panther ENOLASE JGI ISS
PF00113PFAM Enolase, C-terminal TIM barrel domain JGI ISS
UniRef100_A6N0G6UniRef Annotation by Michelle Graham. Most informative UniRef hit: Enolase (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N0G6_ORYSI SoyBaseE_val: 2.00E-66ISS
UniRef100_I1MQ89UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MQ89_SOYBN SoyBaseE_val: 8.00E-69ISS

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma04g34195 not represented in the dataset

Glyma04g34195 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection
Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g173400 Wm82.a2.v1IGC As supplied by JGI

Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

>Glyma04g34195.1   sequence type=CDS   gene model=Glyma04g34195   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGCATTGTGAAGAACTGTCCATGAAAGGTCTTGAGCTTCTGAAGATTGCCATTGCTAAAGCTGGTTACATTGGAAAGGTTGTAGTTGGGATGGATGTTGCTGCTTCAAAATTTTATGATGACAAGGACAAAACCTATCACTTGAATTTTAAGGAAGAGAATAATGATGAATCACAGAAAATCTTAGGAGACAACTTAAAGAATGTGTACAAATCATATGTGGCAGATTATCCAATTGTGTCCATTGAGGATCCATTTGATCAGGATGATTGGGAGCACCATGTGAAATTAATAGTTGAAGTTGGCCAACAAGTCCATATTGTTAGTGATGATCTCCTCTTCACCAACCCGAAGCGTGTGGACAAAGCAATCAAGGAGAAGGTTTGTAATGCCCTTCTGTTGAAGGAAATTGCACTTTTGAGTCAATTTGAACATGAGAATATAATTCAATAG

>Glyma04g34195.1   sequence type=predicted peptide   gene model=Glyma04g34195   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MHCEELSMKGLELLKIAIAKAGYIGKVVVGMDVAASKFYDDKDKTYHLNFKEENNDESQKILGDNLKNVYKSYVADYPIVSIEDPFDQDDWEHHVKLIVEVGQQVHIVSDDLLFTNPKRVDKAIKEKVCNALLLKEIALLSQFEHENIIQ*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
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