|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G36530 | AT | Annotation by Michelle Graham. TAIR10: Enolase | chr2:15321081-15323786 REVERSE LENGTH=444 | SoyBase | E_val: 1.00E-60 | ISS |
GO:0006094 | GO-bp | Annotation by Michelle Graham. GO Biological Process: gluconeogenesis | SoyBase | N/A | ISS |
GO:0006096 | GO-bp | Annotation by Michelle Graham. GO Biological Process: glycolysis | SoyBase | N/A | ISS |
GO:0006098 | GO-bp | Annotation by Michelle Graham. GO Biological Process: pentose-phosphate shunt | SoyBase | N/A | ISS |
GO:0009409 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cold | SoyBase | N/A | ISS |
GO:0009416 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to light stimulus | SoyBase | N/A | ISS |
GO:0009651 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to salt stress | SoyBase | N/A | ISS |
GO:0009737 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to abscisic acid stimulus | SoyBase | N/A | ISS |
GO:0009853 | GO-bp | Annotation by Michelle Graham. GO Biological Process: photorespiration | SoyBase | N/A | ISS |
GO:0046686 | GO-bp | Annotation by Michelle Graham. GO Biological Process: response to cadmium ion | SoyBase | N/A | ISS |
GO:0000015 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: phosphopyruvate hydratase complex | SoyBase | N/A | ISS |
GO:0005634 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: nucleus | SoyBase | N/A | ISS |
GO:0005737 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytoplasm | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0005740 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial envelope | SoyBase | N/A | ISS |
GO:0005829 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: cytosol | SoyBase | N/A | ISS |
GO:0005886 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasma membrane | SoyBase | N/A | ISS |
GO:0009506 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: plasmodesma | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0048046 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: apoplast | SoyBase | N/A | ISS |
GO:0000287 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: magnesium ion binding | SoyBase | N/A | ISS |
GO:0003677 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: DNA binding | SoyBase | N/A | ISS |
GO:0004634 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: phosphopyruvate hydratase activity | SoyBase | N/A | ISS |
GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
PTHR11902 | Panther | ENOLASE | JGI | ISS | |
PF00113 | PFAM | Enolase, C-terminal TIM barrel domain | JGI | ISS | |
UniRef100_A6N0G6 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Enolase (Fragment) n=1 Tax=Oryza sativa Indica Group RepID=A6N0G6_ORYSI | SoyBase | E_val: 2.00E-66 | ISS |
UniRef100_I1MQ89 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1MQ89_SOYBN | SoyBase | E_val: 8.00E-69 | ISS |
Glyma04g34195 not represented in the dataset |
Glyma04g34195 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma.04g173400 | Wm82.a2.v1 | IGC | As supplied by JGI |
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g34195.1 sequence type=CDS gene model=Glyma04g34195 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGCATTGTGAAGAACTGTCCATGAAAGGTCTTGAGCTTCTGAAGATTGCCATTGCTAAAGCTGGTTACATTGGAAAGGTTGTAGTTGGGATGGATGTTGCTGCTTCAAAATTTTATGATGACAAGGACAAAACCTATCACTTGAATTTTAAGGAAGAGAATAATGATGAATCACAGAAAATCTTAGGAGACAACTTAAAGAATGTGTACAAATCATATGTGGCAGATTATCCAATTGTGTCCATTGAGGATCCATTTGATCAGGATGATTGGGAGCACCATGTGAAATTAATAGTTGAAGTTGGCCAACAAGTCCATATTGTTAGTGATGATCTCCTCTTCACCAACCCGAAGCGTGTGGACAAAGCAATCAAGGAGAAGGTTTGTAATGCCCTTCTGTTGAAGGAAATTGCACTTTTGAGTCAATTTGAACATGAGAATATAATTCAATAG
>Glyma04g34195.1 sequence type=predicted peptide gene model=Glyma04g34195 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MHCEELSMKGLELLKIAIAKAGYIGKVVVGMDVAASKFYDDKDKTYHLNFKEENNDESQKILGDNLKNVYKSYVADYPIVSIEDPFDQDDWEHHVKLIVEVGQQVHIVSDDLLFTNPKRVDKAIKEKVCNALLLKEIALLSQFEHENIIQ*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||