|
A newer version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
ATMG00160 | AT | Annotation by Michelle Graham. TAIR10: cytochrome oxidase 2 | chrM:40502-42628 REVERSE LENGTH=260 | SoyBase | E_val: 2.00E-52 | ISS |
GO:0022900 | GO-bp | Annotation by Michelle Graham. GO Biological Process: electron transport chain | SoyBase | N/A | ISS |
GO:0022904 | GO-bp | Annotation by Michelle Graham. GO Biological Process: respiratory electron transport chain | SoyBase | N/A | ISS |
GO:0005739 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrion | SoyBase | N/A | ISS |
GO:0005751 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: mitochondrial respiratory chain complex IV | SoyBase | N/A | ISS |
GO:0009507 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: chloroplast | SoyBase | N/A | ISS |
GO:0016020 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: membrane | SoyBase | N/A | ISS |
GO:0016021 | GO-cc | Annotation by Michelle Graham. GO Cellular Compartment: integral to membrane | SoyBase | N/A | ISS |
GO:0004129 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: cytochrome-c oxidase activity | SoyBase | N/A | ISS |
GO:0005507 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: copper ion binding | SoyBase | N/A | ISS |
GO:0009055 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: electron carrier activity | SoyBase | N/A | ISS |
GO:0016491 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: oxidoreductase activity | SoyBase | N/A | ISS |
GO:0020037 | GO-mf | Annotation by Michelle Graham. GO Molecular Function: heme binding | SoyBase | N/A | ISS |
PTHR22888 | Panther | CYTOCHROME C OXIDASE, SUBUNIT II | JGI | ISS | |
PF00116 | PFAM | Cytochrome C oxidase subunit II, periplasmic domain | JGI | ISS | |
UniRef100_H1ZY34 | UniRef | Annotation by Michelle Graham. Most informative UniRef hit: Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=Laburnum anagyroides RepID=H1ZY34_9FABA | SoyBase | E_val: 6.00E-52 | ISS |
UniRef100_H1ZY34 | UniRef | Annotation by Michelle Graham. Best UniRef hit: Cytochrome c oxidase subunit 2 (Fragment) n=1 Tax=Laburnum anagyroides RepID=H1ZY34_9FABA | SoyBase | E_val: 6.00E-52 | ISS |
Glyma04g32430 not represented in the dataset |
Glyma04g32430 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Corresponding Name | Annotation Version | Evidence | Comments |
---|
Schmutz et al. 2010 Genome sequence of the palaeopolyploid soybean Nature 2010, 463:178-183 |
>Glyma04g32430.1 sequence type=CDS gene model=Glyma04g32430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high ATGTTCATTGTTATACCACCATTTGCTCTGTTATACTCAATGGACGAGGTAGTAGTAGATCCAACCATTACTAGCAAAGTTATTGGACATCAATGGTATCAGATTTATGAGTATTCAGACTATAACAGTTCCAATGAACAGTCACTCACTTTTGACTGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTGTACCAGCCAAAACTCATCTACGTATTATTGTAACACTTGTTGATTTACCTCATAGTTAG
>Glyma04g32430.1 sequence type=predicted peptide gene model=Glyma04g32430 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high MFIVIPPFALLYSMDEVVVDPTITSKVIGHQWYQIYEYSDYNSSNEQSLTFDCYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIVTLVDLPHS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||