Report for Sequence Feature Glyma04g32420
Feature Type: gene_model
Chromosome: Gm04
Start: 37096034
stop: 37098973
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g32420
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G61010 AT
Annotation by Michelle Graham. TAIR10: exocyst subunit exo70 family protein E2 | chr5:24554612-24556531 FORWARD LENGTH=639
SoyBase E_val: 3.00E-176 ISS
GO:0002237 GO-bp
Annotation by Michelle Graham. GO Biological Process: response to molecule of bacterial origin
SoyBase N/A ISS
GO:0006887 GO-bp
Annotation by Michelle Graham. GO Biological Process: exocytosis
SoyBase N/A ISS
GO:0006904 GO-bp
Annotation by Michelle Graham. GO Biological Process: vesicle docking involved in exocytosis
SoyBase N/A ISS
GO:0009627 GO-bp
Annotation by Michelle Graham. GO Biological Process: systemic acquired resistance
SoyBase N/A ISS
GO:0009697 GO-bp
Annotation by Michelle Graham. GO Biological Process: salicylic acid biosynthetic process
SoyBase N/A ISS
GO:0000145 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: exocyst
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0005829 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: cytosol
SoyBase N/A ISS
GO:0070062 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: extracellular vesicular exosome
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
KOG2344
KOG
Exocyst component protein and related proteins
JGI ISS
PTHR12542 Panther
EXOCYST COMPLEX PROTEIN EXO70-RELATED
JGI ISS
PTHR12542:SF7 Panther
EXOCYST COMPLEX PROTEIN EXO70
JGI ISS
PF03081 PFAM
Exo70 exocyst complex subunit
JGI ISS
UniRef100_G7IZB2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Exocyst complex component n=1 Tax=Medicago truncatula RepID=G7IZB2_MEDTR
SoyBase E_val: 0 ISS
UniRef100_I1JWP0 UniRef
Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JWP0_SOYBN
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g32420
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Paralogs of Glyma04g32420
Paralog Evidence Comments
Glyma06g22160 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.3.
Gene model name correspondences to Glyma04g32420 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g162400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g32420
Coding sequences of Glyma04g32420
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g32420.1 sequence type=CDS gene model=Glyma04g32420 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAGGAACATAAATCTGTTATCTCCACCTGTGAACAAGATCAACATGTGGTTGCTGCCGCTCAGCACATTTTGAAGGCACTAGCAGCAAGTAAGAATGTATCTGATGACTTGAGAAAAACCCTTTTGGATATTGAGACACAATTGTCTTCAATTTCCATAGTCAATGAGAGAAAAGGAAGAGAAATCAAGCATTTAGAGAGGCAGCTTAAGTGTGTTGAAGACAAGGTAATGAGGTGGGAGGCAAACCCTTCCAACGAGTCTTCTGAGTATTTGAAAGTTGTTGGTGAAATCCAAGTACTGATTCAGAATTTGGAAAGCTTTTCTGTGAATGAAAAGTGGAAGCAGAAGGAACTTGTTCGGAGAGCAAACGAAATTCTGCAGGTTGCTATGTCAAGGCTTGAGAAAGAGTTGGTCCACATTCTTCTCCAACATAAGCAACACTTAGAGCCTGAATACCTGTATTTCCATTTTAATAGGGTGGATATGGTGTTTGATGAATCGTTTCGTTCGGTTGAGGATGAACAAATCGACGAGGCCTCCCGGAGTAGCGGTGCTAGCCAATCCGAGGCCAGCACTGTTGATTTGGTGAATCCAGCAGTGCTTGAACGTCTCAAGAGCATTGCAAGTGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGTCTTTGTTACATCGAGGAGGGATGCCTTGGCCGAGTATTTTGTCATTCTTGAGATGGAAAAGTTAAGAATTGAGGATGTGCTAAAACTGGAGTGGCATTGCTTGAACCATGAGATAAGGAAATGGGTTCGAGCCATGAAGATCATTGTTCGGGTGTACCTTGTCAGCGAGAAACGATTATGTAAGCAGGTTCTTGGTGACTTTGGATCCTTTTATCAATGTTGCTTTTCTGAAATTTCTCAGAGTTTTATGCTGCACCTCTTGAATTTTGGTGAGGCCGTGGCAATGGGAATGCACACACCAGAAAAAATGTTTCGTTTACTTGACATGTATGAGGTTTTGGAGAAACTTGATGTGGACGTAGATGTTTTGTTCTTTGAAGAAGTTGGTTCTTTTGTAAGAGGAGAGTTTCACAAGCTTCTAAGGAGCTTTGGTGACACTATTAAGTCTACACTTCTGGCATTCAGAAATGCTATTGCATCCAATCATTCAAAGACCCCTTTTCCTCAAGGGGGTGTTCATCATGTTACCAAGTATGTCATGAATTACATCATGGCTCTAGTTGAATATGGTGACACCCTTAATCTCCTTCTTGTTGATGACACCTCAATTGATCCTGCAGGCAACAAAGATGACACACCATGTCTCTCATTGTGTCCAGTGGCTTGCCAATTTCGGTCAATCACCGCAACTCTAGAATCCAACTTGAGCAACAAGTCCAAGTTATACAAAGACGAGGCTTTGCAACATATTTTCATGATGAACAACATTCATTACATGGTGCAAAAGGTCAAGTGCTCTGATCTAAGCCATTTCTTTGGGGACTGTTGGCTTCGCCAGCACATTGCGATGTATCAGCGCGACGCAAGGTGTTACGAGAGGATCTCTTGGGGCTCGGTGCTTTCCATGCTCAAGGAGGGTAGTGTGTCAAATTGTGTCTCACAGAGAACTTTGGAGAAAAGATGCAAAGAGTTCAGCACTGCCTTTGGTGAAGTTTACAGGATCCAGACAGGGTGGTTCATCCTAGACCCTCGACTTCGCGAGGATCTACAAATTTCAGTGTCTCAAAAACTGGTTCTTGCATACAGAACATACATTGGTAGAAACTCATCTAGCATTGCTGAGAAGTATGTCAAGTACACTGAAGATGATCTTCAAAGTTACATTTTGGACCTTTTTCAAGGGTCACCAAAATCTTTGCACTATCCTCAGCACAGAAAGTGA
Predicted protein sequences of Glyma04g32420
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g32420.1 sequence type=predicted peptide gene model=Glyma04g32420 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEEHKSVISTCEQDQHVVAAAQHILKALAASKNVSDDLRKTLLDIETQLSSISIVNERKGREIKHLERQLKCVEDKVMRWEANPSNESSEYLKVVGEIQVLIQNLESFSVNEKWKQKELVRRANEILQVAMSRLEKELVHILLQHKQHLEPEYLYFHFNRVDMVFDESFRSVEDEQIDEASRSSGASQSEASTVDLVNPAVLERLKSIASVMFASKYHQEFCQVFVTSRRDALAEYFVILEMEKLRIEDVLKLEWHCLNHEIRKWVRAMKIIVRVYLVSEKRLCKQVLGDFGSFYQCCFSEISQSFMLHLLNFGEAVAMGMHTPEKMFRLLDMYEVLEKLDVDVDVLFFEEVGSFVRGEFHKLLRSFGDTIKSTLLAFRNAIASNHSKTPFPQGGVHHVTKYVMNYIMALVEYGDTLNLLLVDDTSIDPAGNKDDTPCLSLCPVACQFRSITATLESNLSNKSKLYKDEALQHIFMMNNIHYMVQKVKCSDLSHFFGDCWLRQHIAMYQRDARCYERISWGSVLSMLKEGSVSNCVSQRTLEKRCKEFSTAFGEVYRIQTGWFILDPRLREDLQISVSQKLVLAYRTYIGRNSSSIAEKYVKYTEDDLQSYILDLFQGSPKSLHYPQHRK*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
