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Report for Sequence Feature Glyma04g31190

Feature Type:gene_model
Chromosome:Gm04
Start:35422477
stop:35429149
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g31190
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G25010AT Annotation by Michelle Graham. TAIR10: Aminotransferase-like, plant mobile domain family protein | chr2:10631691-10633547 FORWARD LENGTH=509 SoyBaseE_val: 9.00E-10ISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0003674GO-mf Annotation by Michelle Graham. GO Molecular Function: molecular function SoyBaseN/AISS
PF10536PFAM Plant mobile domain JGI ISS
UniRef100_D3G9M4UniRef Annotation by Michelle Graham. Most informative UniRef hit: IMP dehydrogenase/GMP reductase n=1 Tax=Glycine max RepID=D3G9M4_SOYBN SoyBaseE_val: 1.00E-63ISS
UniRef100_I1JWL4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JWL4_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma04g31190
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g31190 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments

References for Glyma04g31190
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g31190
>Glyma04g31190.1   sequence type=CDS   gene model=Glyma04g31190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGGTTCCTTGCAACTCACATAACACAAGATTGCCATCATCTTTGCAATGCAAGTTGCAACTCTGGTTGGATCCGTCAGTGTTTGATGATGAGCAAGCCCTGTTGAATAGAAGCAGCATCAAGTCATCAACCAAGACTGTTACCGTTGTGTTTGTGTGTGTAAAACCTTGGAGCGCTTCCGATTCACGGGTTGGTCATGATTTGCCCTCCGTCCGTGTTTGGGCGATGGGAATGAGGCTCAGTAAACCATATTGCGGAGGAATATGCCTTTTCACCAATTCAACGAAGTCAGTAGAGAACAGTCAGAGTGGAAGCTATGCATGGGGAGTTGTCGCCCTAGTGCATACGTATGATCATTTGAATGATGCTTGTAAAAGCAGCGGTCGACAGCTTGCTGGTTACATCACTTTATTACAGTGTTGGATATATGAGCATTTTCCCACTGTTCATGAGAGCGTGATTGATCCAGAGTATGATGAGATGTCACCACGTGCCTGCTGGTGGCTTACTACGAAGGCTTATTCGAAGGGATTCCCAGCTTCGACGTACCAGACACGTATAGATGCACTGATGATCCTTGATGTATGTTGGATGCCTTATGGTGAGCATCGAGGAACCATTCCTCCACTACTTACGGGTGCCAGTTTGTCATTTGAAGATATTGACAACAGGATCTCTCATTCGTTCATCACACCGACACAGGCAGTTGATCCGCCCAGACATCCACCTATCCCACACCATGACACATATGTGGAGCCAGATATCCCTGTGGTCCCTGCGACACCAGAAGCTGGACCTTCACATGCACCTTCTGATGTGGAGCAACCTAGACATGCAGTGGATGCGTGCCAAGTGATTGCAGAAAGGTTGGAGCGTTTACTCAACCTAAGGATAGTCACTGTAGGCACAGAGATACATGAGGTTATGGAAGACTGCATCAGGATCGCTAGGGGTGTCACAACAGATGGAAGTGTTTATGTTAGGGCGCAACGAAGACGGTGCACGGATCAGTCGTAG
Predicted protein sequences of Glyma04g31190
>Glyma04g31190.1   sequence type=predicted peptide   gene model=Glyma04g31190   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MVPCNSHNTRLPSSLQCKLQLWLDPSVFDDEQALLNRSSIKSSTKTVTVVFVCVKPWSASDSRVGHDLPSVRVWAMGMRLSKPYCGGICLFTNSTKSVENSQSGSYAWGVVALVHTYDHLNDACKSSGRQLAGYITLLQCWIYEHFPTVHESVIDPEYDEMSPRACWWLTTKAYSKGFPASTYQTRIDALMILDVCWMPYGEHRGTIPPLLTGASLSFEDIDNRISHSFITPTQAVDPPRHPPIPHHDTYVEPDIPVVPATPEAGPSHAPSDVEQPRHAVDACQVIAERLERLLNLRIVTVGTEIHEVMEDCIRIARGVTTDGSVYVRAQRRRCTDQS*






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