Report for Sequence Feature Glyma04g26800
Feature Type: gene_model
Chromosome: Gm04
Start: 30718516
stop: 30731786
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g26800
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G54500 AT
Annotation by Michelle Graham. TAIR10: BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr3:20175792-20178737 REVERSE LENGTH=648
SoyBase E_val: 5.00E-124 ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003674 GO-mf
Annotation by Michelle Graham. GO Molecular Function: molecular function
SoyBase N/A ISS
UniRef100_A8MQN2 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: Dentin sialophosphoprotein-like protein n=2 Tax=Arabidopsis thaliana RepID=A8MQN2_ARATH
SoyBase E_val: 2.00E-14 ISS
UniRef100_UPI000233A1F5 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A1F5 related cluster n=1 Tax=unknown RepID=UPI000233A1F5
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g26800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma04g26800 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g141400 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g26800
Coding sequences of Glyma04g26800
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g26800.2 sequence type=CDS gene model=Glyma04g26800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGATTGTTTTCAGCTAGCTAACATAATATGGGGTGAAGGAGGTGAGAGTGATGATCATATTGTGCCTTATCCAGAGGTAAATGAAGATGTTAGCAACAAAAAAGAATGGAATCAAGAAGCTGCTGCGACTAAGCTCACTGAGCTGAAGAGACCGGAGGCTAAAACTGATTTTCATGAAAGAAAGCTAGGAAGCAGTTCCAACCTTGATAATAGTGGAGAACTACCTACCTCAGGATATGGAACAAATGCATGGCCTGACTTGGCTTTATCCAGTTCAGCTAAAATTGATCATGGTTCCCTGGGTACTGAAGTATCTAATAATTTAAGTGAACTTAGCAAATTGAGTTCATCAAGAGGTGAAGAAACTACACAACATGAAAAGCATGCTGAAATTTTCCAAAATGCTCATGAAGGTAAAGAGCAAGGTCATTTTGTTGATTATGGATGGGCCAACATAGGAAGTTTTGATGACCTTGATCGGATTTTTAGCAATGATGACCCTATATTTGGCCATGCAAGTCTTGATAGTTCTAATGAGCTTTGGTCGTCTAAAGATGTGAGTAACAATGTAGCACCTTTACCATTGGATACACCAAGTTCATCTGGTGCTTTAAGGAACAGAACTGAGTCTTTGGAAATCAAAGAAGAATATGTTCAATGTAGTGATGAATCATTGGACCTCAGCAATGAGAAGATTGGGGGTCCTGGATCCCAAGTTATAGAAAATTCATGCACAACCACAGCTAATGTGGGAAATGGTGGAGTTAGAAGTAAGCCTACTGGAAAGGAACAGCAGGTTTTTAGGCAAAAGAATCTTTTGAAAACTTGGAAAAAATCACTGGTAAAACAAGAGGAGAATACCTTGCAGGATTTCTATGATAATTGGTCTCCTTCAGCAGCACCGGCAAAACAATTTCAGAATCAATTGGCACCTTCTGGTATACAATCTTCTCCCTCTTCAATTCTGGGGCAGCCAAAGCAGATCCAAGGAGCTGAAACCCTATATCAGAATATCATAAATCCATTTGCGGCTTCTTCTGTGTATGGGAACCTTACTAATACATATCCTGCTATGCCAATGCTATCACAGACTCAGCCAGCACTTTCTGGGTACGAAGTGTCTCCTGGTATTGTGAATCCTGTGAATAATTTAGTGGACTCAGTCAAGCCTCAAATCATGACCCCTCAGGAGAAAATTGAAAAATTGAGGAGGCGGCAGCAAATGCAGGCAATGATTGCTATTCAGAAACAACAACAACAATTGGGCCATCAAGTTCCTAGTACTAGTAAATCAAGCACTCAAAAATGTCCTCCAGAAATTCAAAGTCATCTTAGTGATGGGACTGATGACGATCTAAGAACTCTTCCTGCTCTAGATCCACCAATTGAACAAGATGATTCTAATACAATGTCAGTGGCTGTTGGTAATGATTTCGTTGAAGATACCGTATTGTACAGACTTCAGGATATTATATCAAAGTTAGACATCAAAATAAGACTCTGCATCAGAGATAGTTTGTTCCGGTTGGCACAAAGGCATTATACTAGTGATACTAGCAGTACAAACAAAAGTAGCAGAGAAGAACTTGAAGTTGCTGCAAGAGAAGAAAGCATTAGCCAAAACAGATATGCCAGGATGCCTGATGTTGAAACAGAGACGAATCCCATTGATAGAACTGTGGCTCATTTACTTTTTCATAGGCCTATGGAGTTGACCCAAAACTATTCTGACAAGCTGGAGTCACCTATTTCTACCAAATGTGAAAGCAAAGCAGCTAACCCCTTGAACTTTCCAGTGAGTTGCTTACCAGATGAGGACTCGAAAAACAATCAACAACTTTCTCACCTTGGGTTTAAGAATCCTTGGGTTGATGCCCAGTCCATGGATCAAATTAAAAACAGTCCCTGCATAGACACGTCAGAGAATGCTTCAAACACACAGGAACTTGAAGCCTCTCAATGA
Predicted protein sequences of Glyma04g26800
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g26800.2 sequence type=predicted peptide gene model=Glyma04g26800 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MDCFQLANIIWGEGGESDDHIVPYPEVNEDVSNKKEWNQEAAATKLTELKRPEAKTDFHERKLGSSSNLDNSGELPTSGYGTNAWPDLALSSSAKIDHGSLGTEVSNNLSELSKLSSSRGEETTQHEKHAEIFQNAHEGKEQGHFVDYGWANIGSFDDLDRIFSNDDPIFGHASLDSSNELWSSKDVSNNVAPLPLDTPSSSGALRNRTESLEIKEEYVQCSDESLDLSNEKIGGPGSQVIENSCTTTANVGNGGVRSKPTGKEQQVFRQKNLLKTWKKSLVKQEENTLQDFYDNWSPSAAPAKQFQNQLAPSGIQSSPSSILGQPKQIQGAETLYQNIINPFAASSVYGNLTNTYPAMPMLSQTQPALSGYEVSPGIVNPVNNLVDSVKPQIMTPQEKIEKLRRRQQMQAMIAIQKQQQQLGHQVPSTSKSSTQKCPPEIQSHLSDGTDDDLRTLPALDPPIEQDDSNTMSVAVGNDFVEDTVLYRLQDIISKLDIKIRLCIRDSLFRLAQRHYTSDTSSTNKSSREELEVAAREESISQNRYARMPDVETETNPIDRTVAHLLFHRPMELTQNYSDKLESPISTKCESKAANPLNFPVSCLPDEDSKNNQQLSHLGFKNPWVDAQSMDQIKNSPCIDTSENASNTQELEASQ*