Report for Sequence Feature Glyma04g26700
Feature Type: gene_model
Chromosome: Gm04
Start: 30577956
stop: 30584132
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma04g26700
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT3G07940 AT
Annotation by Michelle Graham. TAIR10: Calcium-dependent ARF-type GTPase activating protein family | chr3:2529542-2531368 FORWARD LENGTH=385
SoyBase E_val: 5.00E-167 ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0008270 GO-mf
Annotation by Michelle Graham. GO Molecular Function: zinc ion binding
SoyBase N/A ISS
KOG1030
KOG
Predicted Ca2+-dependent phospholipid-binding protein
JGI ISS
PTHR23180 Panther
CENTAURIN/ARF
JGI ISS
PTHR23180:SF25 Panther
CENTAURIN/ARF-RELATED
JGI ISS
PF00168 PFAM
C2 domain
JGI ISS
PF01412 PFAM
Putative GTPase activating protein for Arf
JGI ISS
UniRef100_G7IYV8 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ADP-ribosylation factor GTPase-activating protein n=1 Tax=Medicago truncatula RepID=G7IYV8_MEDTR
SoyBase E_val: 0 ISS
UniRef100_UPI000233A7CA UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233A7CA related cluster n=1 Tax=unknown RepID=UPI000233A7CA
SoyBase E_val: 0 ISS
Expression Patterns of Glyma04g26700
Gene expression representations made with eFP at the University of Toronto. Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE Gene model name correspondences to Glyma04g26700 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.04g141600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma04g26700
Coding sequences of Glyma04g26700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma04g26700.2 sequence type=CDS gene model=Glyma04g26700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGCTTCAAGCTGGGAACAAGTATTGTGCCGACTGTGGATCATTGGAGCCAAAATGGGTGTCTTCAAGTCATGGAGTATTTATTTGCATCAAATGCTCTGGTATACATAGAAGCCTAGGTGTCCATATATCAAAGGTTCTATCACTAAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTGGTGAAGTTCGGTGGAAATACAGTAATTAATATGAAGTATGAAGCTTGCCTTCCAAGTAACATAAAAAAGCCAAAACCAAATTCATCCATTGAGGAGCGCTCTGATTTTATTAGGAGAAAATATGAGTTTCTACAGTTTTTGGATATTGAAGAAAATTTGTCTTGTCCCTTTGTACCATCTCATGCAAGATGTTCATCATATTCCGAGCGTAGTTCCTCGAGCAACAACTTCCCACAAGACAAAAAACATTATGATAAACAAGAAACTAAAAGTCTTATTGGGAGCACATTTCGAAATAGTTGGGGAAGAAAAGATTCTGAGCATAAGAGTTCAAAGAAGAGCAACTCATTGGCAGGTATGATTGAATTTATTGGGTTGATCAAGGTGAATGTGGTTAAAGGCACTAACCTTGTTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCATATCTCTTGGTCACCAATCAGTGAAGACACGTGTCATAAAAAGTAGTTTAAACCCAGTTTGGAACGAAAGCCTAATGTTGTCAATTCCGGATAACATTCCTCTTCTTAAAGTGCTTGTGTACGACAAGGATATTTTCTCAACGGATGATTTTATGGGAAAGGCTGAAATTGACATTCAACCTCTAGTTTCAGCTGCAAAGGCATATGAAAAATCTTCAATCAATGATTCCTTGCAGCTTGGAAAATGGGTAGCAAATGGTGACAACAATACTCTTGTTAAAGATGGTACCATCTCCCTTGAAGATGGGAAGGTCAAACATGATATCTCAGTGAGACTACAACATGTTGAAAGAGGAGTGCTAGAGATTGAACTCGAATGTGTTCTTCTAACTCAATAG
Predicted protein sequences of Glyma04g26700
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma04g26700.2 sequence type=predicted peptide gene model=Glyma04g26700 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MLQAGNKYCADCGSLEPKWVSSSHGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALVKFGGNTVINMKYEACLPSNIKKPKPNSSIEERSDFIRRKYEFLQFLDIEENLSCPFVPSHARCSSYSERSSSSNNFPQDKKHYDKQETKSLIGSTFRNSWGRKDSEHKSSKKSNSLAGMIEFIGLIKVNVVKGTNLVIRDVMTSDPYVIISLGHQSVKTRVIKSSLNPVWNESLMLSIPDNIPLLKVLVYDKDIFSTDDFMGKAEIDIQPLVSAAKAYEKSSINDSLQLGKWVANGDNNTLVKDGTISLEDGKVKHDISVRLQHVERGVLEIELECVLLTQ*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
