SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma04g26440

Feature Type:gene_model
Chromosome:Gm04
Start:30451627
stop:30453474
Source:JGI
Version:Wm82.a1.v1.1
High confidence:yes



A newer version of this gene model can be found here:

Annotations for Glyma04g26440
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13810AT Annotation by Michelle Graham. TAIR10: Glutaredoxin family protein | chr5:4455769-4456593 FORWARD LENGTH=274 SoyBaseE_val: 1.00E-95ISS
GO:0045454GO-bp Annotation by Michelle Graham. GO Biological Process: cell redox homeostasis SoyBaseN/AISS
GO:0005634GO-cc Annotation by Michelle Graham. GO Cellular Compartment: nucleus SoyBaseN/AISS
GO:0009055GO-mf Annotation by Michelle Graham. GO Molecular Function: electron carrier activity SoyBaseN/AISS
GO:0015035GO-mf Annotation by Michelle Graham. GO Molecular Function: protein disulfide oxidoreductase activity SoyBaseN/AISS
KOG2824 KOG Glutaredoxin-related protein JGI ISS
PTHR10168Panther GLUTAREDOXIN JGI ISS
PTHR10168:SF44Panther GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTE JGI ISS
PF00462PFAM Glutaredoxin JGI ISS
UniRef100_E5GCJ8UniRef Annotation by Michelle Graham. Most informative UniRef hit: Glutaredoxin family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCJ8_CUCME SoyBaseE_val: 3.00E-97ISS
UniRef100_I1JWF4UniRef Annotation by Michelle Graham. Best UniRef hit: Uncharacterized protein n=1 Tax=Glycine max RepID=I1JWF4_SOYBN SoyBaseE_val: 0ISS

Expression Patterns of Glyma04g26440
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Gene model name correspondences to Glyma04g26440 Gene Call Version Wm82.a1.v1.1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g141800 Wm82.a2.v1IGC As supplied by JGI

References for Glyma04g26440
Schmutz et al. 2010
  Genome sequence of the palaeopolyploid soybean
  Nature 2010, 463:178-183

Coding sequences of Glyma04g26440
>Glyma04g26440.1   sequence type=CDS   gene model=Glyma04g26440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
ATGTCGCGGTTCCCGTTCTTCAACCGTTCGAACACGATTCACTCGACGAAATCGGAATCCTCGCAGAAACCCTACCTCGTCCACCACCACCTCCACAATCTTGACCGGTCCGGTTCGGTGAACCGCTTCTACGGTTCAGTGGACTCCATGAAATCCTCAATCCGCGGAAAAATGGTGAAGAAGCTCTGCACCTTATTCGAATCCTCCAAAAAACCCTTGCCAGAACCAGAATCCGAATCTGAATCGTTTTCTTCTTCAAAATCACGTTCAAAAACAGATTCAGATTCGTGCATTACTATATTGTTTCGATTACCCGGCACAGAGGACAGAATAGTTGTGTATTTAACGAGCCTTCGCGGGATTCGGAGAACTTTCGAGGATTGCAACGCGGTCCGCATGATCCTGAAGGGGTTCAGGGTTTGGGTGGACGAGAGGGATGTGTCTATGGACTTGAGCTACAGGGAGGAGCTGCAGCATGTGCTGGGGGAGCACCATGTGGCGCTCCCCCAAGTTTTTATACGAGGGAAGTACATTGGTGGTGCTGATGTGATCAAGCATTTGTTTGAGAGTGGTGACTTGGCGAAGATGATTCTGGAAGGGCTCCCCAAGCTGAAACCCGGGTTCGTGTGTGACAATTGTGGGGACGCGAGGTTCGTGCCGTGCGAGAATTGCAGTGGGAGCAGGAAGGTGTTTGATGAGGATGAAGGGGAATTGAAGAGGTGCTTGGAATGCAATGAGAATGGACTCCTCAGGTGTCCGTATTGCTGTTCTTGA
Predicted protein sequences of Glyma04g26440
>Glyma04g26440.1   sequence type=predicted peptide   gene model=Glyma04g26440   sequence assembly version=Glyma 1.0   annotation version=1.1   JGI Gene Call confidence=high
MSRFPFFNRSNTIHSTKSESSQKPYLVHHHLHNLDRSGSVNRFYGSVDSMKSSIRGKMVKKLCTLFESSKKPLPEPESESESFSSSKSRSKTDSDSCITILFRLPGTEDRIVVYLTSLRGIRRTFEDCNAVRMILKGFRVWVDERDVSMDLSYREELQHVLGEHHVALPQVFIRGKYIGGADVIKHLFESGDLAKMILEGLPKLKPGFVCDNCGDARFVPCENCSGSRKVFDEDEGELKRCLECNENGLLRCPYCCS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo